RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 PCED1AQ9H1Q7 454 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 SMARCAL1Q9NZC9 954 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 PHTF1Q9UMS5 762 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 CYP8B1Q9UNU6 501 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 PCDHGC4Q9Y5F7 938 aa14.21□□□□□ -0.13
CMTM1-201ENST00000328020 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 TTC24A2A3L6 582 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-201ENST00000328020 ERI2A8K979 691 aaKnown RBP14.2□□□□□ -0.14
CMTM1-201ENST00000328020 UPK3BL1B0FP48 263 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 UPK3BL2E5RIL1 263 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PGLSO95336 258 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 EPOP01588 193 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 ADRB3P13945 408 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 CD68P34810 354 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-201ENST00000328020 KCNJ1P48048 391 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 LMAN1P49257 510 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PTPN5P54829 565 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 GDF10P55107 478 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 SKOR1P84550 965 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PPP1R7Q15435 360 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 UGP2Q16851 508 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 NEK5Q6P3R8 708 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 USP45Q70EL2 814 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 CEP68Q76N32 757 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 MAATS1Q7Z4T9 603 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 FAM124AQ86V42 546 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 AADATQ8N5Z0 425 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 OR14C36Q8NHC7 312 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 GAB3Q8WWW8 586 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 NELL1Q92832 810 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 ARRDC3Q96B67 414 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 ECHDC3Q96DC8 303 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
CMTM1-201ENST00000328020 NEUROG2Q9H2A3 272 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PREBQ9HCU5 417 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 PCYOX1Q9UHG3 505 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 HCN4Q9Y3Q4 1203 aa14.2□□□□□ -0.14
CMTM1-201ENST00000328020 SPAG17Q6Q759 2223 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 TSPAN6O43657 245 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 AP1G1O43747 822 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PMPCBO75439 489 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 SEMA4FO95754 770 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 MMP2P08253 660 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 CYP2A6P11509 494 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PSMB4P28070 264 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 DRD3P35462 400 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 CDK18Q07002 472 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 TRAF2Q12933 501 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 DHX34Q14147 1143 aaKnown RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 ELF2Q15723 593 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PCSK7Q16549 785 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 SPDYCQ5MJ68 293 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 AGBL4Q5VU57 503 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PARS2Q7L3T8 475 aaKnown RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PRPF39Q86UA1 669 aaKnown RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 KLHL7Q8IXQ5 586 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 ZBTB44Q8NCP5 570 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 SPATA4Q8NEY3 305 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 OR2T34Q8NGX1 318 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 FOXJ1Q92949 421 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 SLCO2A1Q92959 643 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 FAM131CQ96AQ9 280 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 RMDN1Q96DB5 314 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 TOE1Q96GM8 510 aaKnown RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 FEM1CQ96JP0 617 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 DDX47Q9H0S4 455 aaKnown RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 LRRC40Q9H9A6 602 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 WSB2Q9NYS7 404 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-201ENST00000328020 PLXND1Q9Y4D7 1925 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 MUC6Q6W4X9 2439 aa14.19□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3DA0A087WVF3 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3IA0A087WXS9 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3EA0A087X179 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3KA0A087X1G2 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 IGHV1OR15-9A0A0B4J2B8 117 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3FA6NER0 549 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3LB9A6J9 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 PDE2AO00408 941 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-201ENST00000328020 NDC80O14777 642 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
CMTM1-201ENST00000328020 GJB3O75712 270 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 RHOBTB1O94844 696 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 NDST3O95803 873 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 MT-CYBP00156 380 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-201ENST00000328020 KRT14P02533 472 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TBC1D3HP0C7X1 549 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 TIMP2P16035 220 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 HLA-DPA1P20036 260 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 NUDT1P36639 197 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 GRIA4P48058 902 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 ADPRHP54922 357 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 WNT3AP56704 352 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 DR1Q01658 176 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 RPL6Q02878 288 aaKnown RBP14.18□□□□□ -0.14
CMTM1-201ENST00000328020 DMWDQ09019 674 aa14.18□□□□□ -0.14
CMTM1-201ENST00000328020 PIP5KL1Q5T9C9 394 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms