RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CUL3Q13618 768 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 FSCBQ5H9T9 825 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 RABGAP1LQ5R372 815 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 MANEALQ5VSG8 457 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 DNAJB7Q7Z6W7 309 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 KCNMB4Q86W47 210 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 DCLK2Q8N568 766 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 BLOC1S5Q8TDH9 187 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 MRPL9Q9BYD2 267 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 GLOD4Q9HC38 313 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 DDX18Q9NVP1 670 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 UXTQ9UBK9 157 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HBS1LQ9Y450 684 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TRANK1O15050 2925 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 VWA8A3KMH1 1905 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 ANKRD12Q6UB98 2062 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 CAPN14A8MX76 684 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 MYOGP15173 224 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HMGA1P17096 107 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TCN1P20061 433 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 CCNCP24863 283 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HARS2P49590 506 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 WDR5P61964 334 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 PRPSAP1Q14558 356 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 FASTKD1Q53R41 847 aaKnown RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 N4BP2L1Q5TBK1 243 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 FBXL19Q6PCT2 694 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TMC7Q7Z402 723 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TMPRSS6Q8IU80 811 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 CRLF3Q8IUI8 442 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 MFN1Q8IWA4 741 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 DEFB107AQ8IZN7 70 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HS6ST3Q8IZP7 471 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 OR6P1Q8NGX9 317 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 SH3RF2Q8TEC5 729 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 SLC22A17Q8WUG5 538 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 CDKL2Q92772 493 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 APBB2Q92870 758 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 OMDQ99983 421 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 SEMA3CQ99985 751 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TBL1YQ9BQ87 522 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 LRRC40Q9H9A6 602 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 CERS4Q9HA82 394 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HCFC1R1Q9NWW0 138 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TMEM216Q9P0N5 145 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 TAGLN3Q9UI15 199 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 APPL1Q9UKG1 709 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 ANGPTL2Q9UKU9 493 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 PLLPQ9Y342 182 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 HEMK1Q9Y5R4 338 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-202ENST00000315962 ARL5AQ9Y689 179 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 SLC4A7Q9Y6M7 1214 aa7.68□□□□□ -1.18
TRIM55-202ENST00000315962 A0A088AWK7 358 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 NDC80O14777 642 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 GPR39O43194 453 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 DCXO43602 365 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 SNAP91O60641 907 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TM7SF2O76062 418 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CXCL10P02778 98 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ARSAP15289 507 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 EN2P19622 333 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TACR2P21452 398 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 GABRB3P28472 473 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 RGRP47804 291 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 AP2B1P63010 937 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 SMAD3P84022 425 aaKnown RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CDH17Q12864 832 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 MSLNQ13421 630 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ITPRIPL1Q6GPH6 555 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 DENND5AQ6IQ26 1287 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 SLC8B1Q6J4K2 584 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 RBM23Q86U06 439 aaKnown RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ATP6V0D2Q8N8Y2 350 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PIP4K2CQ8TBX8 421 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 GDPD5Q8WTR4 605 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 DPF3Q92784 378 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 NSMCE3Q96MG7 304 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF558Q96NG5 402 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 ZNF334Q9HCZ1 680 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 RHBDL2Q9NX52 303 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 MTRRQ9UBK8 725 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 TSR3Q9UJK0 312 aaKnown RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CRYL1Q9Y2S2 319 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 YIPF1Q9Y548 306 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 A0A1W2PRU2 124 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 F5H5T6 163 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 H7C4K7 107 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 K7ERQ8 282 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PER2O15055 1255 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CFLARO15519 480 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 HOXA2O43364 376 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 RFPL2O75678 378 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 PEX11BO96011 259 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 AHSGP02765 367 aa7.67□□□□□ -1.18
TRIM55-202ENST00000315962 CNPP09543 421 aaKnown RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 MBL2P11226 248 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-202ENST00000315962 GKP32189 559 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms