RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Coq6Q8R1S0 476 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 DolkQ8R2Y3 534 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Slamf8Q9D3G2 278 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Hipk3Q9ERH7 1192 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ahnak2E9PYB0 1738 aaKnown RBP15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Fam71dD3YV92 440 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ddx43D3Z6P9 646 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Usp39Q3TIX9 564 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Cybrd1Q925G2 290 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ergic3Q9CQE7 383 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Nrf1Q9WU00 503 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Tle6Q9WVB3 581 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Mup18A2BIM8 181 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Fzd1O70421 642 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Mup11P04938 181 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Larp7Q05CL8 570 aaKnown RBP15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Akr1clQ3UXL1 322 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Gm21320Q4FZE8 181 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Trub1Q8C0D0 338 aaKnown RBP15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Samd4aQ8CBY1 711 aaKnown RBP15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Syvn1Q9DBY1 612 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ptf1aQ9QX98 324 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Fam46dB1ATX6 390 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Gm12794L7MTS5 483 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Hoxa2P31245 372 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Lrpap1P55302 360 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Vsx2Q61412 361 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Slc39a14Q75N73 489 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Olfr20Q7TRX9 314 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Vgll2Q8BGW8 322 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Vps26bQ8C0E2 336 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Olfr695Q8VFM3 315 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Q9CPS8 106 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pou5f2Q9DAC9 329 aa15.88■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Il2rbP16297 539 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Scn1bP97952 218 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 LcorlQ3U285 600 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ag2Q3UPL5 249 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Znf280dQ68FE8 974 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Klhl23Q6GQU2 558 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Zfp438Q8BFX2 798 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Reep1Q8BGH4 201 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Noc4lQ8BHY2 516 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Hat1Q8BY71 416 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Trpv3Q8K424 791 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Sh3glb2Q8R3V5 400 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Scd3Q99PL7 359 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Tex22Q9D9U4 189 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Msl3Q9WVG9 525 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Shmt1P50431 478 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Sox8Q04886 464 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Tgm3Q08189 693 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 4930502E18RikQ14BQ3 236 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Q3UE31 404 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Trim50Q810I2 483 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pex26Q8BGI5 305 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Amigo3Q8C2S7 508 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Atp5f1Q9CQQ7 256 aaKnown RBP15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Itgb6Q9Z0T9 787 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Cd36Q08857 472 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Nlrc4Q3UP24 1024 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Mbtd1Q6P5G3 631 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Zswim5Q80TC6 1188 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Tecpr1Q80VP0 1166 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Dhx33Q80VY9 698 aaKnown RBP15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Catsper4Q8BVN3 442 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pkn2Q8BWW9 983 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Colec12Q8K4Q8 742 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pcdhb16Q91Y03 802 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Trps1Q925H1 1281 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 TpbpbQ9CQC0 121 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 2610042L04RikQ9D073 150 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Ddi1Q9DAF3 408 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Dnaja4Q9JMC3 397 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Magel2Q9QZ04 1284 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Gria4Q9Z2W8 902 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Rgsl1H3BL40 1073 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 PrkchP23298 683 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Oprl1P35377 367 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Oaz1P54369 227 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Smpdl3aP70158 445 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 ArvcfP98203 962 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Slc17a7Q3TXX4 560 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Rap1gap2Q5SVL6 712 aaKnown RBP15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Lcp2Q60787 533 aaKnown RBP15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Gsdmdc1Q9D8T2 487 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Rdh14Q9ERI6 334 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Grm3Q9QYS2 879 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Kctd18E0CZ26 429 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pgbd1E9Q492 415 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Rab23P35288 237 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Mc4rP56450 332 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Sppl2bQ3TD49 578 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 MslnQ61468 625 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Slc18a2Q8BRU6 517 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Mcfd2Q8K5B2 145 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Setd7Q8VHL1 366 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Pcdha1Q91Y21 948 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 Snrnp48Q9D361 337 aa15.87■□□□□ 0.13
Clcn3-203ENSMUST00000093490 DnpepQ9Z2W0 473 aa15.87■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 92.1 ms