Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Gm25239-201ENSMUST00000174915 86 ntBASIC38.38■■■■□ 3.73
Trps1Q925H1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Trps1Q925H1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
Trps1Q925H1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Trps1Q925H1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Trps1Q925H1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
Trps1Q925H1 Gm15042-201ENSMUST00000120212 883 ntBASIC34.07■■■■□ 3.04
Trps1Q925H1 Gm15045-201ENSMUST00000117359 883 ntBASIC33.43■■■□□ 2.94
Trps1Q925H1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Trps1Q925H1 Psd-208ENSMUST00000224556 2034 ntBASIC33.25■■■□□ 2.91
Trps1Q925H1 Gm24109-201ENSMUST00000175489 103 ntBASIC33.04■■■□□ 2.88
Trps1Q925H1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Trps1Q925H1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Trps1Q925H1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.73■■■□□ 2.83
Trps1Q925H1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Trps1Q925H1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Trps1Q925H1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trps1Q925H1 Gm23366-201ENSMUST00000175022 89 ntBASIC32.12■■■□□ 2.73
Trps1Q925H1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trps1Q925H1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trps1Q925H1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Trps1Q925H1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Trps1Q925H1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Trps1Q925H1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Trps1Q925H1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Trps1Q925H1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Trps1Q925H1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.89■■■□□ 2.7
Trps1Q925H1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trps1Q925H1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Trps1Q925H1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trps1Q925H1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trps1Q925H1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.52■■■□□ 2.64
Trps1Q925H1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Trps1Q925H1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trps1Q925H1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trps1Q925H1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Trps1Q925H1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.26■■■□□ 2.59
Trps1Q925H1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trps1Q925H1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trps1Q925H1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Trps1Q925H1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.96■■■□□ 2.55
Trps1Q925H1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trps1Q925H1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.63■■■□□ 2.49
Trps1Q925H1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Trps1Q925H1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trps1Q925H1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.6■■■□□ 2.49
Trps1Q925H1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Trps1Q925H1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.51■■■□□ 2.47
Trps1Q925H1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trps1Q925H1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Trps1Q925H1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Trps1Q925H1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Trps1Q925H1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trps1Q925H1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trps1Q925H1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Trps1Q925H1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trps1Q925H1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.42
Trps1Q925H1 Gm25238-201ENSMUST00000174914 89 ntBASIC30.12■■■□□ 2.41
Trps1Q925H1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trps1Q925H1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trps1Q925H1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trps1Q925H1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.02■■■□□ 2.4
Trps1Q925H1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.99■■■□□ 2.39
Trps1Q925H1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.97■■■□□ 2.39
Trps1Q925H1 Gm27325-201ENSMUST00000175467 74 ntBASIC29.96■■■□□ 2.39
Trps1Q925H1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trps1Q925H1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Trps1Q925H1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Trps1Q925H1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Trps1Q925H1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.89■■■□□ 2.38
Trps1Q925H1 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.88■■■□□ 2.37
Trps1Q925H1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.75■■■□□ 2.35
Trps1Q925H1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Trps1Q925H1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Trps1Q925H1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.59■■■□□ 2.33
Trps1Q925H1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
Trps1Q925H1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Trps1Q925H1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trps1Q925H1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Trps1Q925H1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Trps1Q925H1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Trps1Q925H1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Trps1Q925H1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Trps1Q925H1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Trps1Q925H1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Trps1Q925H1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.32■■■□□ 2.28
Trps1Q925H1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Trps1Q925H1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.31■■■□□ 2.28
Trps1Q925H1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.3■■■□□ 2.28
Trps1Q925H1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Trps1Q925H1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Trps1Q925H1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Trps1Q925H1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Trps1Q925H1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Trps1Q925H1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trps1Q925H1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Trps1Q925H1 Rab21-202ENSMUST00000218831 843 ntBASIC29.06■■■□□ 2.24
Trps1Q925H1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
Trps1Q925H1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.04■■■□□ 2.24
Trps1Q925H1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.01■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms