RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 ASB12Q8WXK4 309 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 FEM1CQ96JP0 617 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 LENG8Q96PV6 779 aaPredicted RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 EIF3CQ99613 913 aaKnown RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 DKK3Q9UBP4 350 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 UBA2Q9UBT2 640 aaPredicted RBP11.29□□□□□ -0.6
CTSC-206ENST00000529974 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 HS3ST3A1Q9Y663 406 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 ADAMTS20P59510 1910 aa11.29□□□□□ -0.6
CTSC-206ENST00000529974 MGAQ8IWI9 3026 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 KNTC1P50748 2209 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 FFAR2O15552 330 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 SERPINC1P01008 464 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 C1SP09871 688 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 NME1P15531 152 aaKnown RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 TIMP2P16035 220 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 CKMT2P17540 419 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 DESP17661 470 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ACP1P24666 158 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 IL1R2P27930 398 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 RABIFP47224 123 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 PAPOLAP51003 745 aaKnown RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 PFN3P60673 137 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 FANCCQ00597 558 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 HES3Q5TGS1 186 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 PARGQ86W56 976 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 TMPRSS12Q86WS5 348 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ZSWIM9Q86XI8 627 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ZNF548Q8NEK5 533 aaPredicted RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 CPEB1Q9BZB8 566 aaKnown RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
CTSC-206ENST00000529974 U3KQA8 63 aa11.28□□□□□ -0.6
CTSC-206ENST00000529974 CACNA1GO43497 2377 aa11.27□□□□□ -0.6
CTSC-206ENST00000529974 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 TRABD2BA6NFA1 517 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 NEMP1O14524 444 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 FPGTO14772 594 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 MUSKO15146 869 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 BUB1BO60566 1050 aaPredicted RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 NEBLO76041 1014 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 CSF2P04141 144 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 MYBL1P10243 752 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 ERCC2P18074 760 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 PCK1P35558 622 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 MMP12P39900 470 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 SGCGQ13326 291 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 ILKQ13418 452 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 PDE1CQ14123 709 aaPredicted RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 PPP6R3Q5H9R7 873 aaPredicted RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 VPS36Q86VN1 386 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 DCP2Q8IU60 420 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 PSTKQ8IV42 348 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 TP53I13Q8NBR0 393 aaPredicted RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 CENPTQ96BT3 561 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 WRAP53Q9BUR4 548 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 MBNL1Q9NR56 388 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 NLGN3Q9NZ94 848 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 CWC15Q9P013 229 aaKnown RBP11.27□□□□□ -0.61
CTSC-206ENST00000529974 MYO1AQ9UBC5 1043 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 RAXQ9Y2V3 346 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 GPSM3Q9Y4H4 160 aa11.27□□□□□ -0.61
CTSC-206ENST00000529974 ASXL3Q9C0F0 2248 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 SCAMP1O15126 338 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 MMP20O60882 483 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 RNF8O76064 485 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 GYPCP04921 128 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 CDK4P11802 303 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 CKMT1AP12532 417 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 MYF5P13349 255 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 HNF1BP35680 557 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 HNRNPKP61978 463 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTSC-206ENST00000529974 INSM1Q01101 510 aaPredicted RBP11.26□□□□□ -0.61
CTSC-206ENST00000529974 RAD51Q06609 339 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 CYP4F3Q08477 520 aa11.26□□□□□ -0.61
CTSC-206ENST00000529974 IRF4Q15306 451 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms