RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 OPHN1O60890 802 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 PMPCBO75439 489 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 GCATO75600 419 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 MMP2P08253 660 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 SERPINF2P08697 491 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 TDGF1P13385 188 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 CES1P23141 567 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 PSMB4P28070 264 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 TPMTP51580 245 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 SKOR1P84550 965 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 C2orf54Q08AI8 447 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 TRAF2Q12933 501 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 GRM3Q14832 879 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 RALGPS1Q5JS13 557 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 LRRC73Q5JTD7 316 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 FAXCQ5TGI0 409 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 ALG1LQ6GMV1 187 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 PARS2Q7L3T8 475 aaKnown RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 PPP1R16AQ96I34 528 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 ZNF641Q96N77 438 aaPredicted RBP12.02□□□□□ -0.49
CUX1-210ENST00000497815 SLC25A51Q9H1U9 297 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 SUV39H2Q9H5I1 410 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 FBXL12Q9NXK8 326 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 FBXO4Q9UKT5 387 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 NCKAP1Q9Y2A7 1128 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 RAI2Q9Y5P3 530 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 NCOR1O75376 2440 aa12.02□□□□□ -0.49
CUX1-210ENST00000497815 CKAP5Q14008 2032 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 METTL18O95568 372 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 PRKCGP05129 697 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 SP9P0CG40 484 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
CUX1-210ENST00000497815 ITGB7P26010 798 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 DRD3P35462 400 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 ACTN2P35609 894 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 P2RY2P41231 377 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 FNTAP49354 379 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 VPS41P49754 854 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 TERF1P54274 439 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 LMNB2Q03252 620 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 ZBTB16Q05516 673 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
CUX1-210ENST00000497815 SRSF5Q13243 272 aaKnown RBP12.01□□□□□ -0.49
CUX1-210ENST00000497815 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 P3H1Q32P28 736 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 FBXL19Q6PCT2 694 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 SPATA4Q8NEY3 305 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 IPMKQ8NFU5 416 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 RTP4Q96DX8 246 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 OXNAD1Q96HP4 312 aaPredicted RBP12.01□□□□□ -0.49
CUX1-210ENST00000497815 FCRL5Q96RD9 977 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 ITM2CQ9NQX7 267 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 SCML1Q9UN30 329 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 CHKBQ9Y259 395 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 PCDHB9Q9Y5E1 797 aa12.01□□□□□ -0.49
CUX1-210ENST00000497815 PRR23AA6NEV1 266 aa12□□□□□ -0.49
CUX1-210ENST00000497815 FAM47DPA6NHR8 397 aa12□□□□□ -0.49
CUX1-210ENST00000497815 CCDC188H7C350 402 aa12□□□□□ -0.49
CUX1-210ENST00000497815 TRAFD1O14545 582 aaPredicted RBP12□□□□□ -0.49
CUX1-210ENST00000497815 SOCS5O75159 536 aa12□□□□□ -0.49
CUX1-210ENST00000497815 ZNF217O75362 1048 aa12□□□□□ -0.49
CUX1-210ENST00000497815 ECEL1O95672 775 aa12□□□□□ -0.49
CUX1-210ENST00000497815 CPP00450 1065 aa12□□□□□ -0.49
CUX1-210ENST00000497815 KRT14P02533 472 aa12□□□□□ -0.49
CUX1-210ENST00000497815 PDHA1P08559 390 aa12□□□□□ -0.49
CUX1-210ENST00000497815 ITIH2P19823 946 aa12□□□□□ -0.49
CUX1-210ENST00000497815 CA4P22748 312 aa12□□□□□ -0.49
CUX1-210ENST00000497815 HOXA6P31267 233 aa12□□□□□ -0.49
CUX1-210ENST00000497815 RPL22P35268 128 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 NEK3P51956 506 aa12□□□□□ -0.49
CUX1-210ENST00000497815 SEMG2Q02383 582 aa12□□□□□ -0.49
CUX1-210ENST00000497815 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 GALNT3Q14435 633 aa12□□□□□ -0.49
CUX1-210ENST00000497815 SPARCL1Q14515 664 aa12□□□□□ -0.49
CUX1-210ENST00000497815 WHAMMP3Q1A5X7 153 aa12□□□□□ -0.49
CUX1-210ENST00000497815 PARP6Q2NL67 630 aa12□□□□□ -0.49
CUX1-210ENST00000497815 USP39Q53GS9 565 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 ARMC12Q5T9G4 340 aa12□□□□□ -0.49
CUX1-210ENST00000497815 ERN2Q76MJ5 926 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 TTC7BQ86TV6 843 aa12□□□□□ -0.49
CUX1-210ENST00000497815 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
CUX1-210ENST00000497815 LPCAT1Q8NF37 534 aa12□□□□□ -0.49
CUX1-210ENST00000497815 GRK7Q8WTQ7 553 aa12□□□□□ -0.49
CUX1-210ENST00000497815 IFT43Q96FT9 208 aa12□□□□□ -0.49
CUX1-210ENST00000497815 SPACA7Q96KW9 195 aa12□□□□□ -0.49
CUX1-210ENST00000497815 KRT12Q99456 494 aa12□□□□□ -0.49
CUX1-210ENST00000497815 GORASP1Q9BQQ3 440 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms