RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm379J3QQ19 296 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ets2P15037 468 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Olfm3P63056 478 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 CtrcQ3SYP2 268 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PterQ60866 349 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Itga3Q62470 1053 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 L3mbtl3Q8BLB7 883 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PvrQ8K094 408 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Olfr847Q8VFF4 312 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Aim2Q91VJ1 354 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pcdhgb5Q91XX5 926 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Nmd3Q99L48 503 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Snx24Q9CRB0 169 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PigkQ9CXY9 395 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pgm1Q9D0F9 562 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrrc57Q9D1G5 239 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cpb2Q9JHH6 422 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 EefsecQ9JHW4 583 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Aldh18a1Q9Z110 795 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dock6Q8VDR9 2080 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 5830411N06RikB3F5L4 1112 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm5930D3Z257 264 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 9330159F19RikD3Z623 648 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AvilO88398 819 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrrc4bP0C192 709 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pola2P33611 600 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rhox5P52651 210 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SiaeP70665 541 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 GsapQ3TCV3 858 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tmeff1Q6PFE7 372 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cpa1Q7TPZ8 419 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Actr5Q80US4 605 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SheQ8BSD5 492 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Camk1dQ8BW96 385 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 C1raQ8CG16 707 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ttc4Q8R3H9 386 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SdhbQ9CQA3 282 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Snx2Q9CWK8 519 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Setd6Q9CWY3 473 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf146Q9CZW6 359 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rasgef1cQ9D300 466 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ndel1Q9ERR1 345 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tmem59Q9QY73 323 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mmrn1B2RPV6 1210 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm8257E9Q8R3 264 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 DldO08749 509 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ptpn9O35239 593 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Klc1O88447 541 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Krt10P02535 570 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 RargP18911 458 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Prdx3P20108 257 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gria2P23819 883 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AmhP27106 555 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Atxn10P28658 475 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Emilin3P59900 758 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AurkaP97477 395 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dok6Q2MHE5 331 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mrgprx2Q3UG50 352 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lcp1Q61233 627 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bcl2l1Q64373 233 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pdk1Q8BFP9 434 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 B130006D01RikQ8BRH6 153 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pi15Q8BS03 258 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Socs4Q91ZA6 436 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rev1Q920Q2 1249 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 EpgnQ924X1 152 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rrp8Q9DB85 457 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kat2bQ9JHD1 813 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 ApipQ9WVQ5 241 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Prune2Q52KR3 3084 aa6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Arid1aA2BH40 2283 aaKnown RBP6.97□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cacna1aP97445 2368 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trmt1lA2RSY6 728 aaKnown RBP6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Scgb2b7D3YYY1 112 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 1700011I03RikE9PYL8 271 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Srsf5O35326 269 aaKnown RBP6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dmp1O55188 503 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Akap3O88987 864 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rab20P35295 233 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 VdrP48281 422 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Apobec1P51908 229 aaKnown RBP6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 E330034G19RikQ3UWX6 351 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bahd1Q497V6 772 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm13103Q4VAD2 491 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf215Q5SPX3 379 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 StilQ60988 1262 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 TdrpQ8C5P7 182 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Nek8Q91ZR4 698 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ubox5Q925F4 539 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pfdn1Q9CWM4 122 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Orc3Q9JK30 715 aaKnown RBP6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc22a3Q9WTW5 551 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rps6ka2Q9WUT3 733 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gipc1Q9Z0G0 333 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ddx39bQ9Z1N5 428 aaKnown RBP6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Unc80Q8BLN6 3261 aa6.96□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Col9a3A2ACT7 680 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Klhl32A2AJX0 620 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam46dB1ATX6 390 aa6.96□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam47eD3YWC7 402 aa6.96□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 78.7 ms