Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Gm25239-201ENSMUST00000174915 86 ntBASIC38.68■■■■□ 3.78
Pcdhgb5Q91XX5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Pcdhgb5Q91XX5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Pcdhgb5Q91XX5 Gm15042-201ENSMUST00000120212 883 ntBASIC33.78■■■■□ 3
Pcdhgb5Q91XX5 Gm24109-201ENSMUST00000175489 103 ntBASIC33.52■■■□□ 2.96
Pcdhgb5Q91XX5 Gm15045-201ENSMUST00000117359 883 ntBASIC32.92■■■□□ 2.86
Pcdhgb5Q91XX5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pcdhgb5Q91XX5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Pcdhgb5Q91XX5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Pcdhgb5Q91XX5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Pcdhgb5Q91XX5 Gm23366-201ENSMUST00000175022 89 ntBASIC32.38■■■□□ 2.77
Pcdhgb5Q91XX5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pcdhgb5Q91XX5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Pcdhgb5Q91XX5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Pcdhgb5Q91XX5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pcdhgb5Q91XX5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.29■■■□□ 2.6
Pcdhgb5Q91XX5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pcdhgb5Q91XX5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
Pcdhgb5Q91XX5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.03■■■□□ 2.56
Pcdhgb5Q91XX5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Pcdhgb5Q91XX5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Pcdhgb5Q91XX5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.93■■■□□ 2.54
Pcdhgb5Q91XX5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Pcdhgb5Q91XX5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pcdhgb5Q91XX5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcdhgb5Q91XX5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.66■■■□□ 2.5
Pcdhgb5Q91XX5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcdhgb5Q91XX5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcdhgb5Q91XX5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pcdhgb5Q91XX5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pcdhgb5Q91XX5 Gm25238-201ENSMUST00000174914 89 ntBASIC30.51■■■□□ 2.47
Pcdhgb5Q91XX5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pcdhgb5Q91XX5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pcdhgb5Q91XX5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.32■■■□□ 2.44
Pcdhgb5Q91XX5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pcdhgb5Q91XX5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
Pcdhgb5Q91XX5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pcdhgb5Q91XX5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pcdhgb5Q91XX5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Pcdhgb5Q91XX5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.81■■■□□ 2.36
Pcdhgb5Q91XX5 Psd-208ENSMUST00000224556 2034 ntBASIC29.78■■■□□ 2.36
Pcdhgb5Q91XX5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.76■■■□□ 2.35
Pcdhgb5Q91XX5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.68■■■□□ 2.34
Pcdhgb5Q91XX5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Pcdhgb5Q91XX5 Gm27325-201ENSMUST00000175467 74 ntBASIC29.56■■■□□ 2.32
Pcdhgb5Q91XX5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.5■■■□□ 2.31
Pcdhgb5Q91XX5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhgb5Q91XX5 Gm25262-201ENSMUST00000174934 133 ntBASIC29.39■■■□□ 2.3
Pcdhgb5Q91XX5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdhgb5Q91XX5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhgb5Q91XX5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.27■■■□□ 2.28
Pcdhgb5Q91XX5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhgb5Q91XX5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhgb5Q91XX5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdhgb5Q91XX5 Rab21-202ENSMUST00000218831 843 ntBASIC29.12■■■□□ 2.25
Pcdhgb5Q91XX5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.1■■■□□ 2.25
Pcdhgb5Q91XX5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.05■■■□□ 2.24
Pcdhgb5Q91XX5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.94■■■□□ 2.22
Pcdhgb5Q91XX5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.9■■■□□ 2.22
Pcdhgb5Q91XX5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhgb5Q91XX5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.83■■■□□ 2.21
Pcdhgb5Q91XX5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhgb5Q91XX5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhgb5Q91XX5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhgb5Q91XX5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.71■■■□□ 2.19
Pcdhgb5Q91XX5 Gm26115-201ENSMUST00000175605 87 ntBASIC28.69■■■□□ 2.18
Pcdhgb5Q91XX5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhgb5Q91XX5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhgb5Q91XX5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.66■■■□□ 2.18
Pcdhgb5Q91XX5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Pcdhgb5Q91XX5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Pcdhgb5Q91XX5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhgb5Q91XX5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhgb5Q91XX5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhgb5Q91XX5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Pcdhgb5Q91XX5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.55■■■□□ 2.16
Pcdhgb5Q91XX5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Pcdhgb5Q91XX5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Pcdhgb5Q91XX5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhgb5Q91XX5 Gm8109-201ENSMUST00000194076 746 ntBASIC28.44■■■□□ 2.14
Pcdhgb5Q91XX5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdhgb5Q91XX5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdhgb5Q91XX5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.41■■■□□ 2.14
Pcdhgb5Q91XX5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
Pcdhgb5Q91XX5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhgb5Q91XX5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pcdhgb5Q91XX5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhgb5Q91XX5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhgb5Q91XX5 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.27■■■□□ 2.12
Pcdhgb5Q91XX5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhgb5Q91XX5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.26■■■□□ 2.11
Pcdhgb5Q91XX5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.26■■■□□ 2.11
Pcdhgb5Q91XX5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pcdhgb5Q91XX5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhgb5Q91XX5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pcdhgb5Q91XX5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Pcdhgb5Q91XX5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhgb5Q91XX5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.08■■■□□ 2.09
Pcdhgb5Q91XX5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhgb5Q91XX5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms