Protein–RNA interactions for Protein: Q8CG16

C1ra, Complement C1r-A subcomponent, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1raQ8CG16 Gm25239-201ENSMUST00000174915 86 ntBASIC38.45■■■■□ 3.75
C1raQ8CG16 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
C1raQ8CG16 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
C1raQ8CG16 Gm15042-201ENSMUST00000120212 883 ntBASIC33.58■■■□□ 2.97
C1raQ8CG16 Gm24109-201ENSMUST00000175489 103 ntBASIC33.32■■■□□ 2.92
C1raQ8CG16 Gm15045-201ENSMUST00000117359 883 ntBASIC32.78■■■□□ 2.84
C1raQ8CG16 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
C1raQ8CG16 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
C1raQ8CG16 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
C1raQ8CG16 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
C1raQ8CG16 Gm23366-201ENSMUST00000175022 89 ntBASIC32.14■■■□□ 2.74
C1raQ8CG16 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
C1raQ8CG16 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
C1raQ8CG16 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
C1raQ8CG16 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
C1raQ8CG16 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.11■■■□□ 2.57
C1raQ8CG16 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
C1raQ8CG16 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31■■■□□ 2.55
C1raQ8CG16 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
C1raQ8CG16 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.89■■■□□ 2.54
C1raQ8CG16 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.87■■■□□ 2.53
C1raQ8CG16 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
C1raQ8CG16 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
C1raQ8CG16 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
C1raQ8CG16 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
C1raQ8CG16 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
C1raQ8CG16 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
C1raQ8CG16 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
C1raQ8CG16 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
C1raQ8CG16 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.39■■■□□ 2.46
C1raQ8CG16 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
C1raQ8CG16 Gm25238-201ENSMUST00000174914 89 ntBASIC30.34■■■□□ 2.45
C1raQ8CG16 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
C1raQ8CG16 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.23■■■□□ 2.43
C1raQ8CG16 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
C1raQ8CG16 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
C1raQ8CG16 Psd-208ENSMUST00000224556 2034 ntBASIC29.93■■■□□ 2.38
C1raQ8CG16 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
C1raQ8CG16 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.67■■■□□ 2.34
C1raQ8CG16 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
C1raQ8CG16 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.6■■■□□ 2.33
C1raQ8CG16 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
C1raQ8CG16 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.42■■■□□ 2.3
C1raQ8CG16 Gm27325-201ENSMUST00000175467 74 ntBASIC29.39■■■□□ 2.3
C1raQ8CG16 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
C1raQ8CG16 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
C1raQ8CG16 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
C1raQ8CG16 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
C1raQ8CG16 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.27■■■□□ 2.28
C1raQ8CG16 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
C1raQ8CG16 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
C1raQ8CG16 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.14■■■□□ 2.26
C1raQ8CG16 Gm25262-201ENSMUST00000174934 133 ntBASIC29.14■■■□□ 2.26
C1raQ8CG16 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
C1raQ8CG16 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
C1raQ8CG16 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.95■■■□□ 2.23
C1raQ8CG16 Rab21-202ENSMUST00000218831 843 ntBASIC28.92■■■□□ 2.22
C1raQ8CG16 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.89■■■□□ 2.22
C1raQ8CG16 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
C1raQ8CG16 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
C1raQ8CG16 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.84■■■□□ 2.21
C1raQ8CG16 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
C1raQ8CG16 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
C1raQ8CG16 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
C1raQ8CG16 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
C1raQ8CG16 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.66■■■□□ 2.18
C1raQ8CG16 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.61■■■□□ 2.17
C1raQ8CG16 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.59■■■□□ 2.17
C1raQ8CG16 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
C1raQ8CG16 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
C1raQ8CG16 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
C1raQ8CG16 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
C1raQ8CG16 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.51■■■□□ 2.15
C1raQ8CG16 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
C1raQ8CG16 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.46■■■□□ 2.15
C1raQ8CG16 Gm26115-201ENSMUST00000175605 87 ntBASIC28.43■■■□□ 2.14
C1raQ8CG16 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
C1raQ8CG16 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
C1raQ8CG16 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
C1raQ8CG16 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
C1raQ8CG16 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
C1raQ8CG16 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C1raQ8CG16 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
C1raQ8CG16 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
C1raQ8CG16 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C1raQ8CG16 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
C1raQ8CG16 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
C1raQ8CG16 Gm8109-201ENSMUST00000194076 746 ntBASIC28.26■■■□□ 2.11
C1raQ8CG16 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.23■■■□□ 2.11
C1raQ8CG16 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
C1raQ8CG16 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
C1raQ8CG16 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.18■■■□□ 2.1
C1raQ8CG16 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
C1raQ8CG16 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.15■■■□□ 2.1
C1raQ8CG16 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.14■■■□□ 2.1
C1raQ8CG16 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
C1raQ8CG16 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.06■■■□□ 2.08
C1raQ8CG16 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
C1raQ8CG16 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.02■■■□□ 2.08
C1raQ8CG16 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms