RNA–Protein interactions for RNA: ENST00000543736.5

FANCA-205, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-205ENST00000543736 CHD5Q8TDI0 1954 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 CDC14CA4D256 554 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 STK17BO94768 372 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 DLGAP3O95886 979 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 THRAP10827 490 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 CLPPQ16740 277 aaPredicted RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 SLC6A19Q695T7 634 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 CXorf57Q6NSI4 855 aaKnown RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 ZSCAN30Q86W11 494 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 ASB12Q8WXK4 309 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 SNRNP40Q96DI7 357 aaKnown RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 ALG14Q96F25 216 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 TRIT1Q9H3H1 467 aaKnown RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 ASF1BQ9NVP2 202 aa13.16□□□□□ -0.3
FANCA-205ENST00000543736 FARP1Q9Y4F1 1045 aaPredicted RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
FANCA-205ENST00000543736 RTTNQ86VV8 2226 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 B4DGG1 531 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 LRRTM2O43300 516 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 AP1G1O43747 822 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 LRCH4O75427 683 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 RASGRP1O95267 797 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 ASS1P00966 412 aaKnown RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 SRCP12931 536 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 MPSTP25325 297 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 GJB2P29033 226 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 CLCN1P35523 988 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 PER3P56645 1201 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 SRSF11Q05519 484 aaKnown RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 SGSM1Q2NKQ1 1148 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 CPZQ66K79 652 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 OR4D9Q8NGE8 314 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
FANCA-205ENST00000543736 CROTQ9UKG9 612 aa13.15□□□□□ -0.3
FANCA-205ENST00000543736 MN1Q10571 1320 aaPredicted RBP13.14□□□□□ -0.31
FANCA-205ENST00000543736 A6NCN8 305 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 CLIC2O15247 247 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 SPTLC2O15270 562 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 INPP4BO15327 924 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 EIF3DO15371 548 aaKnown RBP eCLIP13.14□□□□□ -0.31
FANCA-205ENST00000543736 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 LEFTY1O75610 366 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 MOCS2O96007 188 aaPredicted RBP13.14□□□□□ -0.31
FANCA-205ENST00000543736 MT-CO1P00395 513 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 SNRPB2P08579 225 aaKnown RBP13.14□□□□□ -0.31
FANCA-205ENST00000543736 CD58P19256 250 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 CD1CP29017 333 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 CSF2RBP32927 897 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 DLSTP36957 453 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 DPYDQ12882 1025 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 RAP1GAP2Q684P5 730 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
FANCA-205ENST00000543736 ESX1Q8N693 406 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 FAM46DQ8NEK8 389 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 PNPLA2Q96AD5 504 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 RBM15Q96T37 977 aaKnown RBP eCLIP13.14□□□□□ -0.31
FANCA-205ENST00000543736 MDFIQ99750 246 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
FANCA-205ENST00000543736 TMEM9Q9P0T7 183 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 COL6A5A8TX70 2615 aa13.14□□□□□ -0.31
FANCA-205ENST00000543736 K7ERQ8 282 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 PRICKLE3O43900 615 aaPredicted RBP13.13□□□□□ -0.31
FANCA-205ENST00000543736 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CD1EP15812 388 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 NFKBIAP25963 317 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 AP3M2P53677 418 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 ITGA1P56199 1179 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CLDN10P78369 228 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CENPCQ03188 943 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CDK18Q07002 472 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 NR1D2Q14995 579 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 CHSY1Q86X52 802 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 TAF4BQ92750 862 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 TATDN2Q93075 761 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
FANCA-205ENST00000543736 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms