RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 GGT5P36269 586 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 NKX2-5P52952 324 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 BACE1P56817 501 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 MAP3K7CLP57077 242 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PMS2P3Q13401 168 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 DNASE1L3Q13609 305 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 HEATR4Q86WZ0 1026 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 RALGPS2Q86X27 583 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PGAM4Q8N0Y7 254 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 CLEC4FQ8N1N0 589 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 CPNE1Q99829 537 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 OSBPL6Q9BZF3 934 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PRDM8Q9NQV8 689 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 SMOXQ9NWM0 555 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 CNTN6Q9UQ52 1028 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 TMEM247A6NEH6 219 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 TCAF2A6NFQ2 919 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 DENRO43583 198 aaKnown RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 SIX3O95343 332 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ELK4P28324 431 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 OLFML1Q6UWY5 402 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 MIER2Q8N344 545 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 FIBCD1Q8N539 461 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 SMYD1Q8NB12 490 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PBXIP1Q96AQ6 731 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 LRRC39Q96DD0 335 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 RNF145Q96MT1 663 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 UTP6Q9NYH9 597 aaKnown RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 U3KQV3 271 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 LINC00854A0A1B0GVQ3 168 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 TRIM38O00635 465 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 AHSGP02765 367 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 CCDC166P0CW27 439 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ARF4P18085 180 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 VARSP26640 1264 aaKnown RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 MAXP61244 160 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PRKCQQ04759 706 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 DMPKQ09013 629 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PRKAA1Q13131 559 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 CCDC153Q494R4 210 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ZPBP2Q6X784 338 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ADGRG6Q86SQ4 1221 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 TUBGCP3Q96CW5 907 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 KCNA7Q96RP8 456 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 C1orf50Q9BV19 199 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 FRMD8P1Q9BZ68 369 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 PNPLA8Q9NP80 782 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ITM2CQ9NQX7 267 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 DAPK2Q9UIK4 370 aa14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-201ENST00000318607 ERI2A8K979 691 aaKnown RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 BDNFP23560 247 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 APLP1P51693 650 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 TAS2R39P59534 338 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 C1QTNF8P60827 252 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 RBP5P82980 135 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 KCTD8Q6ZWB6 473 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 PAF1Q8N7H5 531 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 SHCBP1Q8NEM2 672 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 GPATCH1Q9BRR8 931 aaKnown RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 OSBPL11Q9BXB4 747 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 CROTQ9UKG9 612 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 OR51F1A6NGY5 319 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 AP3B1O00203 1094 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 ACKR2O00590 384 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 GCATO75600 419 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 STMN1P16949 149 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 ZNF26P17031 533 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 IST1P53990 364 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 SURF1Q15526 300 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 RABL3Q5HYI8 236 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 RBM20Q5T481 1227 aaKnown RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 IER5Q5VY09 327 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 LIPMQ5VYY2 423 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 TMEM74Q96NL1 305 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 TSPAN18Q96SJ8 248 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 FSD1LQ9BXM9 530 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 PLGRKTQ9HBL7 147 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 OLAHQ9NV23 265 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 PNMA8BQ9ULN7 279 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-201ENST00000318607 TIMM22Q9Y584 194 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 FAM95CA0A1B0GW59 222 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 A6NL46 340 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 ANGPT2O15123 496 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 GABBR2O75899 941 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 LINC00032P0C843 101 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 INSRRP14616 1297 aa14.34□□□□□ -0.11
PABPC1-201ENST00000318607 LIMK2P53671 638 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms