RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SQORQ9Y6N5 450 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 A0A096LPK6 155 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 SH3PXD2BA1X283 911 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 MYBPHLA2RUH7 354 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 CAPN15O75808 1086 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 VAPBO95292 243 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 VARSP26640 1264 aaKnown RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 CPT1AP50416 773 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 DAOAP59103 153 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 ART3Q13508 389 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 HERC3Q15034 1050 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 FSTL4Q6MZW2 842 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 CROCCP3Q8IVE0 287 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 MARK4Q96L34 752 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 NAT9Q9BTE0 207 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 CAAP1Q9H8G2 361 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 CAB39LQ9H9S4 337 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 EFCAB1Q9HAE3 211 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 OLAHQ9NV23 265 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 RAP2CQ9Y3L5 183 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 TADA2AO75478 443 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 ENTPD1P49961 510 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 RPL14P50914 215 aaKnown RBP19.15■□□□□ 0.66
SNX4-201ENST00000251775 CBX3Q13185 183 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 SEMA3BQ13214 749 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 ITGA7Q13683 1181 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 ZBTB8BQ8NAP8 495 aaPredicted RBP19.15■□□□□ 0.66
SNX4-201ENST00000251775 OR52K1Q8NGK4 314 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 TMA16Q96EY4 203 aaKnown RBP19.15■□□□□ 0.66
SNX4-201ENST00000251775 AGAP3Q96P47 875 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 NPAS2Q99743 824 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 OSBPL11Q9BXB4 747 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 TMEM165Q9HC07 324 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 ZBTB26Q9HCK0 441 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 OXSMQ9NWU1 459 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 USP12O75317 370 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 POLBP06746 335 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 PTPN3P26045 913 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 LIMK2P53671 638 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 NSUN2Q08J23 767 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX4-201ENST00000251775 FAM35AQ86V20 835 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 PCED1BQ96HM7 432 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 SLC9A7Q96T83 725 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 PLGRKTQ9HBL7 147 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 NMRAL1Q9HBL8 299 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 KLHL8Q9P2G9 620 aaPredicted RBP19.15■□□□□ 0.66
SNX4-201ENST00000251775 MYRFQ9Y2G1 1151 aa19.15■□□□□ 0.66
SNX4-201ENST00000251775 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
SNX4-201ENST00000251775 TCAF2A6NFQ2 919 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 TTC36A6NLP5 189 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 H2AFYO75367 372 aaKnown RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 JUNP05412 331 aaKnown RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 USP17L7P0C7H9 530 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 ADSLP30566 484 aaPredicted RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 SPRP35270 261 aaPredicted RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 ABCG1P45844 678 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 ELMSAN1Q6PJG2 1045 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 PTAR1Q7Z6K3 402 aaPredicted RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 STRA8Q7Z7C7 330 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 NPWQ8N729 165 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 SREK1Q8WXA9 508 aaKnown RBP19.14■□□□□ 0.65
SNX4-201ENST00000251775 LRTOMTQ8WZ04 291 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 UPF1Q92900 1129 aaKnown RBP eCLIP19.14■□□□□ 0.65
SNX4-201ENST00000251775 NTAN1Q96AB6 310 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 GAD1Q99259 594 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 DRC3Q9H069 523 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 AP5M1Q9H0R1 490 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 MIOSQ9NXC5 875 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 TRIM38O00635 465 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 CSPG5O95196 566 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 PIGNO95427 931 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 TFEBP19484 476 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 HOXC8P31273 242 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 CD97P48960 835 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 SPANXN3Q5MJ09 141 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 MYO1HQ8N1T3 1032 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 C3orf58Q8NDZ4 430 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 AGAP2Q99490 1192 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 TMEM79Q9BSE2 394 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 OSBPL6Q9BZF3 934 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 ZDHHC2Q9UIJ5 367 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 AP4S1Q9Y587 144 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 TRPM7Q96QT4 1865 aa19.14■□□□□ 0.65
SNX4-201ENST00000251775 BOLA2-SMG1P6H3BVE0 249 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 SUPT3HO75486 399 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 C2P06681 752 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 FGFR3P22607 806 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 CLCNKBP51801 687 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 TPI1P60174 286 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 TUBA4AP68366 448 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 IRF5Q13568 498 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 ARL13AQ5H913 290 aaPredicted RBP19.13■□□□□ 0.65
SNX4-201ENST00000251775 LZTR1Q8N653 840 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 URGCPQ8TCY9 931 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 SLC29A1Q99808 456 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 PNPLA3Q9NST1 481 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 FBXW11Q9UKB1 542 aa19.13■□□□□ 0.65
SNX4-201ENST00000251775 SNX10Q9Y5X0 201 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms