RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Rrn3B2RS91 656 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Mtnd4P03911 459 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Dnmt3cP0DOY1 709 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 ChgbP16014 677 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 ArsaP50428 506 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Ext2P70428 718 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Prdx5P99029 210 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Ubtfl1Q3USZ2 394 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Etaa1Q5SVT3 877 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 ScinQ60604 715 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Olfr1057Q7TR75 315 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Baiap2l2Q80Y61 522 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Tmem154Q8C4Q9 181 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Mtfr1Q99MB2 328 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Fam212aQ9CX62 282 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 Gria4Q9Z2W8 902 aa16.4■□□□□ 0.22
Prpf40b-212ENSMUST00000145482 ClockO08785 855 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Serpinb9O08797 374 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ly9Q01965 654 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ttc9Q3V038 219 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Acot5Q6Q2Z6 421 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Echs1Q8BH95 290 aaKnown RBP16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Nipsnap3bQ9CQE1 247 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 S100a14Q9D2Q8 104 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Strn3Q9ERG2 796 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Sbf2E9PXF8 1872 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Cdh1P09803 884 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Nat3P50296 290 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Clcn3P51791 818 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Kcnj8P97794 424 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 SirpaP97797 513 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Gm3414Q3TNU4 584 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Tnks2Q3UES3 1166 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Magee2Q52KG3 523 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Lrrc8eQ66JT1 795 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Pum3Q8BKS9 647 aaKnown RBP16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Mettl24Q8CCB5 363 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Lpin1Q91ZP3 924 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Trps1Q925H1 1281 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Rgs3Q9DC04 966 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ppp1r2Q9DCL8 206 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Hsd17b14E9Q3D4 273 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Gm13128L7MU96 475 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Psmb9P28076 219 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Gpc4P51655 557 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Mrgprb1Q3UG61 350 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Myo1dQ5SYD0 1006 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Podnl1Q6P3Y9 559 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Sox11Q7M6Y2 395 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Rpf1Q7TND5 349 aaKnown RBP16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Amigo2Q80ZD9 519 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Wwp1Q8BZZ3 918 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Lurap1lQ8K2P1 221 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ttc4Q8R3H9 386 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 FdpsQ920E5 353 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Slco1a4Q9EP96 670 aa16.39■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Akap17bA2A3V1 959 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Spin2dB1B0R2 236 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Mtx3D3YTP3 312 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Lire1P11260 357 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 GsnP13020 780 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Slc2a3P32037 493 aaKnown RBP16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Sycp3P70281 254 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Nr4a2Q06219 598 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Nt5c2Q3V1L4 560 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Zfp90Q61967 636 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Chst10Q6PGK7 356 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Il17reQ8BH06 637 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Dars2Q8BIP0 653 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Mrps35Q8BJZ4 320 aaKnown RBP16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Kctd4Q9D7X1 259 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Hcar2Q9EP66 360 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Slco1c1Q9ERB5 715 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Chrnb2Q9ERK7 501 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Prpmp5E9PXN1 296 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Zc3h12bG3X9I7 835 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Tpst1O70281 370 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Hoxc6P10629 235 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Pabpc1P29341 636 aaKnown RBP16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 DmpkP54265 631 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ccdc85aQ5SP85 500 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Scube3Q66PY1 993 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ahcyl2Q68FL4 613 aaKnown RBP16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Mtrf1lQ8BJU9 373 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 ScaiQ8C8N2 606 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Tmem98Q91X86 226 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 B4galt3Q91YY2 395 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Q9CPZ3 230 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Slc13a2Q9ES88 586 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Morf4l2Q9R0Q4 288 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Cdh22Q9WTP5 813 aa16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 PhipQ8VDD9 1821 aaKnown RBP16.38■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Bclaf3A2AG58 752 aaKnown RBP16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Ces1bD3Z5G7 567 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 FgaE9PV24 789 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Gm17175E9Q528 179 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Vmn2r14E9Q759 848 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Vmn1r39G3UWE6 305 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 Crabp2P22935 138 aa16.37■□□□□ 0.21
Prpf40b-212ENSMUST00000145482 S100a9P31725 113 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms