RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 NRCAMQ92823 1304 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 A0A1B0GTW7 788 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 A0A1W2PPW3 197 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 RGS13O14921 159 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 MSCO60682 206 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ENO1P06733 434 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 BMPR1AP36894 532 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 ACLYP53396 1101 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 MYBPC1Q00872 1141 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 MEI1Q5TIA1 1274 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 CADM2Q8N3J6 435 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 LEMD2Q8NC56 503 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 GSTCDQ8NEC7 633 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 C10orf82Q8WW14 230 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 MCEEQ96PE7 176 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 DEPDC7Q96QD5 511 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 CLPBQ9H078 707 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 AVENQ9NQS1 362 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 NAGPAQ9UK23 515 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 DOCK5Q9H7D0 1870 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 FAM155AB1AL88 458 aaPredicted RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 MTSS1O43312 755 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 HMGCRP04035 888 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PIM1P11309 404 aaPredicted RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 CDH1P12830 882 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 CYP11B1P15538 503 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 GPD2P43304 727 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 MAPK10P53779 464 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 EPHB1P54762 984 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 ACTR3P61158 418 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PURAQ00577 322 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 MBTD1Q05BQ5 628 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SP140Q13342 867 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 GALNT18Q6P9A2 607 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 BNC2Q6ZN30 1099 aaPredicted RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 TTC7BQ86TV6 843 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TMA16Q96EY4 203 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 RHOBTB2Q9BYZ6 727 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 HOXD1Q9GZZ0 328 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 RAD21L1Q9H4I0 556 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 MAGEE1Q9HCI5 957 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 ACTR3BQ9P1U1 418 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 EPS15L1Q9UBC2 864 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 FAM8A1Q9UBU6 413 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PFDN2Q9UHV9 154 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 FAM172BPA6NC97 362 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 POC1B-GALNT4F8VUJ3 575 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 KCNJ1P48048 391 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 IRX4P78413 519 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PRKCQQ04759 706 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 CALCOCO2Q13137 446 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 CUL2Q13617 745 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 ALCAMQ13740 583 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SPARCL1Q14515 664 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 LDLRAP1Q5SW96 308 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 FAM102AQ5T9C2 384 aaPredicted RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 TERB1Q8NA31 727 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 DBF4BQ8NFT6 615 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 ADAMTS16Q8TE57 1224 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 BAP1Q92560 729 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PAWRQ96IZ0 340 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 CFAP57Q96MR6 1250 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PRM3Q9NNZ6 103 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 IGSF5Q9NSI5 407 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 MAT2BQ9NZL9 334 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PCDHGB3Q9Y5G1 929 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 A0A0B4J269 797 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 FADS2P1A8MWK0 482 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 RIPK2O43353 540 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 DUSP11O75319 330 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 SOAT2O75908 522 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 NPPAP01160 153 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SNRPAP09012 282 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 SERPINB1P30740 379 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 ABCG1P45844 678 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 NDST1P52848 882 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TRAF2Q12933 501 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 MAPK11Q15759 364 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SLC18A3Q16572 532 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 B3GNT9Q6UX72 402 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SETD3Q86TU7 594 aaPredicted RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 ULK2Q8IYT8 1036 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 AHI1Q8N157 1196 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 NXPE3Q969Y0 559 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 VPS33AQ96AX1 596 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 BTBD9Q96Q07 612 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 B3GNT5Q9BYG0 378 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 MKRN2Q9H000 416 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 SIK2Q9H0K1 926 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms