RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 GALNT3Q14435 633 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 PRPSAP1Q14558 356 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 PTPRRQ15256 657 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 TOMM20Q15388 145 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 SLC45A4Q5BKX6 768 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 RABGAP1LQ5R372 815 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 LRRC38Q5VT99 294 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 PTAR1Q7Z6K3 402 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 SKA2Q8WVK7 121 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 POF1BQ8WVV4 589 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 IFT43Q96FT9 208 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 ZFYVE19Q96K21 471 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 TRIM55Q9BYV6 548 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 C20orf96Q9NUD7 363 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 ZDHHC18Q9NUE0 388 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 FBXW11Q9UKB1 542 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 YIPF1Q9Y548 306 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 CPQQ9Y646 472 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 HS3ST4Q9Y661 456 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 NUMA1Q14980 2115 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 TRIM49D1C9J1S8 452 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 AXIN1O15169 862 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 STAMBPO95630 424 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 HSPA8P11142 646 aaKnown RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 CCNB1P14635 433 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 IRS1P35568 1242 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 GABRB2P47870 512 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 GJA8P48165 433 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 TUFMP49411 452 aaKnown RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 CDK7P50613 346 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 FBXL22Q6P050 247 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 STRADAQ7RTN6 431 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 ATP6V0D2Q8N8Y2 350 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 ART4Q93070 314 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 HMCESQ96FZ2 354 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 SERPINB12Q96P63 405 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 CLSTN3Q9BQT9 956 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 MMADHCQ9H3L0 296 aaPredicted RBP8.36□□□□□ -1.07
ABCA4-207ENST00000536513 TRABDQ9H4I3 376 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 EBF2Q9HAK2 575 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 CHRAC1Q9NRG0 131 aa8.36□□□□□ -1.07
ABCA4-207ENST00000536513 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 C3orf70A6NLC5 250 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 IRAK2O43187 625 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 HNRNPRO43390 633 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 SNAP91O60641 907 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TBL1XO60907 577 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 VAPBO95292 243 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 GSTA2P09210 222 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZFXP17010 805 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PTPN9P43378 593 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ARFIP2P53365 341 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 DSC2Q02487 901 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF177Q13360 481 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 MED21Q13503 144 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 RIPK1Q13546 671 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PPM1LQ5SGD2 360 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 C16orf46Q6P387 395 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CD300LGQ6UXG3 332 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PRPF39Q86UA1 669 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 SPPL2BQ8TCT7 592 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 IGSF8Q969P0 613 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 OLFM3Q96PB7 478 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PAFAH2Q99487 392 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 THTPAQ9BU02 230 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CATSPERBQ9H7T0 1116 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CFAP97Q9P2B7 532 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PDP2Q9P2J9 529 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 PCDHGC4Q9Y5F7 938 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZFP37Q9Y6Q3 630 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 KCNU1A8MYU2 1149 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CES2O00748 559 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 DPYSL4O14531 572 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 INPPL1O15357 1258 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ENO1P06733 434 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ACADSP16219 412 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ATF6P18850 670 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TGM2P21980 687 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 HOXC8P31273 242 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 SLC11A2P49281 568 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ERVFC1P60507 584 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 DSC1Q08554 894 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 SLC10A7Q0GE19 358 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 ZBTB17Q13105 803 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 GPR17Q13304 367 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TSTA3Q13630 321 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TAF1BQ53T94 588 aaPredicted RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 C9orf50Q5SZB4 431 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 TRAF7Q6Q0C0 670 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 WDR75Q8IWA0 830 aaKnown RBP8.35□□□□□ -1.07
ABCA4-207ENST00000536513 CHCHD4Q8N4Q1 142 aa8.35□□□□□ -1.07
ABCA4-207ENST00000536513 SLC35B2Q8TB61 432 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms