RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SCML2	Q9UQR0	700 aa		13.74	□□□□□ -0.21
DDR1-225	ENST00000376568	GPC4	O75487	556 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	SASH3	O75995	380 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	EMC10	Q5UCC4	262 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	LRRC38	Q5VT99	294 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	FYB2	Q5VWT5	728 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	NINJ2	Q9NZG7	142 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	ATAD5	Q96QE3	1844 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568		A0A1B0GVM2	712 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	TCAF2	A6NFQ2	919 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	CLDN11	O75508	207 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	STC2	O76061	302 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	CEBPB	P17676	345 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	DSG1	Q02413	1049 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	CREM	Q03060	361 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	CAV1	Q03135	178 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	TEX44	Q53QW1	395 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	OR14C36	Q8NHC7	312 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	FAM71B	Q8TC56	605 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	TBL1Y	Q9BQ87	522 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	PABPC3	Q9H361	631 aa	Known RBP	13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	3e-12	■■■■□ 22.7
DDR1-225	ENST00000376568	ADAM21	Q9UKJ8	722 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	APC2	O95996	2303 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	LINC01565	O15544	149 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	OPHN1	O60890	802 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	FDFT1	P37268	417 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	IL9R	Q01113	521 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	SMARCB1	Q12824	385 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	CDH17	Q12864	832 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	SLC10A2	Q12908	348 aa	Predicted RBP	13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	KLHL38	Q2WGJ6	581 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	SYTL3	Q4VX76	610 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	PIK3R6	Q5UE93	754 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	ZNF449	Q6P9G9	518 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	UNC5A	Q6ZN44	842 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	BPIFB1	Q8TDL5	484 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	FNIP1	Q8TF40	1166 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	TSPAN18	Q96SJ8	248 aa		13.73	□□□□□ -0.21
DDR1-225	ENST00000376568	HEPACAM2	A8MVW5	462 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	SLC9A3R1	O14745	358 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	KIAA0355	O15063	1070 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	GJB3	O75712	270 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	HSPA4L	O95757	839 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	S100B	P04271	92 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PYGB	P11216	843 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PTPRR	Q15256	657 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	NCBP2-AS2	Q69YL0	99 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ZCCHC23	Q6ZST2	131 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	CMC1	Q7Z7K0	106 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	TRAPPC5	Q8IUR0	188 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	NUDCD3	Q8IVD9	361 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	NPW	Q8N729	165 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ANKS4B	Q8N8V4	417 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PRMT1	Q99873	361 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	MLPH	Q9BV36	600 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	TRMT61B	Q9BVS5	477 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	XAB2	Q9HCS7	855 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	STK38L	Q9Y2H1	464 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	RWDD3	Q9Y3V2	267 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	KCTD3	Q9Y597	815 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	TMEM120B	A0PK00	339 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	IFT88	Q13099	833 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	MPP3	Q13368	585 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	CCDC6	Q16204	474 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FNBP1L	Q5T0N5	605 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ANO7	Q6IWH7	933 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	SZRD1	Q7Z422	152 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PSTK	Q8IV42	348 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	LZTR1	Q8N653	840 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	OR4K2	Q8NGD2	314 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FGF13	Q92913	245 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	KLHL32	Q96NJ5	620 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ADGRE3	Q9BY15	652 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ASB8	Q9H765	288 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	LRRC40	Q9H9A6	602 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FBXO10	Q9UK96	956 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	CA14	Q9ULX7	337 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	TLR6	Q9Y2C9	796 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FAM186A	A6NE01	2351 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	VGLL3	A8MV65	326 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FGF10	O15520	208 aa	Predicted RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	ADH1C	P00326	375 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	NR2C2	P49116	596 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PTP4A2	Q12974	167 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	RAB33A	Q14088	237 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PLA2G4E	Q3MJ16	856 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	MPPE1	Q53F39	396 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	FAM26D	Q5JW98	314 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PRAMEF14	Q5SWL7	426 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	CRTC3	Q6UUV7	619 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	GAREM2	Q75VX8	874 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	MPP5	Q8N3R9	675 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	PQLC3	Q8N755	202 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	RTL3	Q8N8U3	475 aa	Known RBP	13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	TBATA	Q96M53	351 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	CWH43	Q9H720	699 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	RAI2	Q9Y5P3	530 aa		13.72	□□□□□ -0.21
DDR1-225	ENST00000376568	DIAPH2	O60879	1101 aa		13.71	□□□□□ -0.21

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