RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NR1D1P20393 614 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 GJB2P29033 226 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 TKTL1P51854 596 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 DLG4P78352 724 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 ZFP36L1Q07352 338 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 C1orf61Q13536 156 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 SGSM1Q2NKQ1 1148 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 TMEM259Q4ZIN3 620 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 NEK5Q6P3R8 708 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 PTAR1Q7Z6K3 402 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 PARGQ86W56 976 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 DCP2Q8IU60 420 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 CFAP52Q8N1V2 620 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 SDR16C5Q8N3Y7 309 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 ZNF557Q8N988 423 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 HJURPQ8NCD3 748 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 ZNF507Q8TCN5 953 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 PARD3BQ8TEW8 1205 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 NKD1Q969G9 470 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 GFM1Q96RP9 751 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 IL12RB2Q99665 862 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 UBXN6Q9BZV1 441 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 STRADBQ9C0K7 418 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 CLPBQ9H078 707 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 APOBEC3GQ9HC16 384 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 PADI4Q9UM07 663 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 DAAM1Q9Y4D1 1078 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 HS3ST3A1Q9Y663 406 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 LRP4O75096 1905 aa7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 RP1L1Q8IWN7 2480 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-217ENST00000580654 UNC13CQ8NB66 2214 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 APCP25054 2843 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 A0A087X0B3 334 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 TMX2-CTNND1H3BSU7 103 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 MCF2LO15068 1137 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 ZBED1O96006 694 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 RPLP0P05388 317 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 CELA2BP08218 269 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 ITGB7P26010 798 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 MAPK10P53779 464 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 ADKP55263 362 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 KLRB1Q12918 225 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 CDH18Q13634 790 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 ZACNQ401N2 412 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 MS4A13Q5J8X5 152 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 FAM46CQ5VWP2 391 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 BSPRYQ5W0U4 402 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 MSANTD2Q6P1R3 559 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 MAMDC2Q7Z304 686 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 TMPRSS9Q7Z410 1059 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 KYQ8NBH2 561 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 OR8D1Q8WZ84 308 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 PMEPA1Q969W9 287 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 CPEB1Q9BZB8 566 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 NUCKS1Q9H1E3 243 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 CEP83Q9Y592 693 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 PCDHB11Q9Y5F2 797 aa7.88□□□□□ -1.15
SMARCE1-217ENST00000580654 C1QTNF3-AMACRE9PGA6 284 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 LMO7DNF2Z398 122 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 EIF3DO15371 548 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 YY2O15391 372 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 NKX2-8O15522 239 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 DUX1O43812 170 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 ATP9BO43861 1147 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 P4HA1P13674 534 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 CD58P19256 250 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 CD82P27701 267 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 SLC11A2P49281 568 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 AP3M2P53677 418 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 PDE1CQ14123 709 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 ZNF394Q53GI3 561 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 LACTB2Q53H82 288 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 DCAF6Q58WW2 860 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 PRRT3Q5FWE3 981 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 C1orf220Q5T0J3 134 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 RRAGBQ5VZM2 374 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 RNF219Q5W0B1 726 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 NUGGCQ68CJ6 796 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 Q6ZVU0 165 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 C12orf56Q8IXR9 622 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 FAM174AQ8TBP5 190 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 RNF139Q8WU17 664 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 TAF4BQ92750 862 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 AZIN2Q96A70 460 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 FCRL2Q96LA5 508 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 TMEM74Q96NL1 305 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 KLF6Q99612 283 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 LRRC61Q9BV99 259 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 LRRN3Q9H3W5 708 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-217ENST00000580654 SPASTQ9UBP0 616 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms