RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CNPP09543 421 aaKnown RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 NEK3P51956 506 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF135P52742 658 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 MGAT5Q09328 741 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 PTPRCAPQ14761 206 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ZCCHC23Q6ZST2 131 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 LZTR1Q8N653 840 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ARL14EPQ8N8R7 260 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-205ENST00000538545 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 APOPT1Q96IL0 206 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 VAT1Q99536 393 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 ACSS2Q9NR19 701 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 PHTF1Q9UMS5 762 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 KIAA1671Q9BY89 1806 aa14.36□□□□□ -0.11
ACTN1-205ENST00000538545 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 A0A0U1RQS6 177 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 F5H5T6 163 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 MYO1CO00159 1063 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 PARNO95453 639 aaKnown RBP14.35□□□□□ -0.11
ACTN1-205ENST00000538545 EN2P19622 333 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-205ENST00000538545 ETV4P43268 484 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 PRPSAP1Q14558 356 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 TMEM135Q86UB9 458 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 DENND6AQ8IWF6 608 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
ACTN1-205ENST00000538545 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 BADQ92934 168 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 NSMCE3Q96MG7 304 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 FCRL5Q96RD9 977 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 SMG9Q9H0W8 520 aaKnown RBP14.35□□□□□ -0.11
ACTN1-205ENST00000538545 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 C2orf71A6NGG8 1288 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 SRRM3A6NNA2 597 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-205ENST00000538545 ACSL4O60488 711 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 FGF18O76093 207 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 NEFHP12036 1026 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 ELF1P32519 619 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 WNT3AP56704 352 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 SLC18A2Q05940 514 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 CDH17Q12864 832 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 CTBP1Q13363 440 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 PDK4Q16654 411 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 MARC1Q5VT66 337 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 STRA8Q7Z7C7 330 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 MOCOSQ96EN8 888 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 PPCSQ9HAB8 311 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 PLK2Q9NYY3 685 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
ACTN1-205ENST00000538545 MMP2P08253 660 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 ITGA2BP08514 1039 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 SMARCB1Q12824 385 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 PTPRRQ15256 657 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 CNGA3Q16281 694 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 KCNMB4Q86W47 210 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 KCTD3Q9Y597 815 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 INSL5Q9Y5Q6 135 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 TRANK1O15050 2925 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 AURKAO14965 403 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 CACNG3O60359 315 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 KRT38O76015 456 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 VAPBO95292 243 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 HSPA8P11142 646 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 RGRP47804 291 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 PDE1BQ01064 536 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 NRG1Q02297 640 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 PDE1CQ14123 709 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 OTOAQ7RTW8 1153 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 ZBED2Q9BTP6 218 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 MRPL17Q9NRX2 175 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 DCTN4Q9UJW0 460 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF180Q9UJW8 692 aa14.34□□□□□ -0.11
ACTN1-205ENST00000538545 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
ACTN1-205ENST00000538545 DRGXA6NNA5 263 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 WASH4PA8MWX3 477 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 TGM5O43548 720 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 DNAJC6O75061 913 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 ZWINTO95229 277 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 MBL2P11226 248 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 MPP1Q00013 466 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 IRF9Q00978 393 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 CBLBQ13191 982 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF460Q14592 562 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 FSCBQ5H9T9 825 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 TEDDM1Q5T9Z0 273 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 SPATA21Q7Z572 469 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 LDB1Q86U70 411 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 PLD6Q8N2A8 252 aaKnown RBP14.33□□□□□ -0.11
ACTN1-205ENST00000538545 DCLK2Q8N568 766 aa14.33□□□□□ -0.11
ACTN1-205ENST00000538545 ARMC5Q96C12 935 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms