RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 TSSK1BQ9BXA7 367 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 MAGEH1Q9H213 219 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 SP110Q9HB58 689 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
PKP4-213ENST00000486254 STOML2Q9UJZ1 356 aa12.16□□□□□ -0.46
PKP4-213ENST00000486254 CEP350Q5VT06 3117 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 F5H423 210 aaPredicted RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 F5H5T6 163 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 ACSL4O60488 711 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 USP12O75317 370 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 SOAT2O75908 522 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 NEBLO76041 1014 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 MPOP05164 745 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PAMP19021 973 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TACR2P21452 398 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PBX3P40426 434 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 SCTRP47872 440 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 BMPR2Q13873 1038 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 ALFQ53S48 1182 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 CERCAMQ5T4B2 595 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 MROH9Q5TGP6 573 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 CDHR3Q6ZTQ4 885 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 KIAA0408Q6ZU52 694 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 FAM47EQ6ZV65 393 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 NLRP9Q7RTR0 991 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 OTOP3Q7RTS5 596 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 DEFB128Q7Z7B8 93 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 MIB1Q86YT6 1006 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PPHLN1Q8NEY8 458 aaKnown RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 C10orf82Q8WW14 230 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 MRGPRX2Q96LB1 330 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 DDX50Q9BQ39 737 aaKnown RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TRIM55Q9BYV6 548 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 RASSF4Q9H2L5 321 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 RHOJQ9H4E5 214 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 SLCO1B3Q9NPD5 702 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PCMTD2Q9NV79 361 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
PKP4-213ENST00000486254 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 TCAF1Q9Y4C2 921 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PSAT1Q9Y617 370 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 ANAPC1Q9H1A4 1944 aa12.15□□□□□ -0.46
PKP4-213ENST00000486254 PLXNA4Q9HCM2 1894 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 CFAP73A6NFT4 308 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 TPP1O14773 563 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 ADAM12O43184 909 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 PRAMEF11O60813 436 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 ATP5HO75947 161 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 TBX18O95935 607 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 BPGMP07738 259 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 ETFBP38117 255 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 GJA8P48165 433 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 HARS2P49590 506 aaKnown RBP12.14□□□□□ -0.47
PKP4-213ENST00000486254 CDH4P55283 916 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 BNIP1Q12981 228 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 PLD1Q13393 1074 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 PDE1CQ14123 709 aaPredicted RBP12.14□□□□□ -0.47
PKP4-213ENST00000486254 RFTN1Q14699 578 aaPredicted RBP12.14□□□□□ -0.47
PKP4-213ENST00000486254 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 SETDB1Q15047 1291 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 POLD3Q15054 466 aaPredicted RBP12.14□□□□□ -0.47
PKP4-213ENST00000486254 CCDC153Q494R4 210 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 NADSYN1Q6IA69 706 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 ZNF783Q6ZMS7 281 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 IGSF8Q969P0 613 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 MFSD3Q96ES6 412 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 GPR22Q99680 433 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 FAM167BQ9BTA0 163 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 PDFQ9HBH1 243 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 SPG21Q9NZD8 308 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 MID2Q9UJV3 735 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
PKP4-213ENST00000486254 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ATP9BO43861 1147 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 PLIN3O60664 434 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 SNNO75324 88 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 CLDN11O75508 207 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 CNTN5O94779 1100 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 TIMP1P01033 207 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 URODP06132 367 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 APOA4P06727 396 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 CES1P23141 567 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ALDH1A3P47895 512 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms