RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 POM121BA6NF01 834 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 MAGEC1O60732 1142 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 CLDN11O75508 207 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ZMPSTE24O75844 475 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 SMC2O95347 1197 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 GP1BAP07359 652 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 PNMA6AP0CW24 399 aaPredicted RBP11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 SLC9A1P19634 815 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 HNRNPA2B1P22626 353 aaKnown RBP11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 CHRNA3P32297 505 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ACTN2P35609 894 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 NNMTP40261 264 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 CXCR3P49682 368 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 CDH4P55283 916 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 STX17P56962 302 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 CDK17Q00537 523 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 FZD2Q14332 565 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ACCSLQ4AC99 568 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 NEK5Q6P3R8 708 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 LINGO4Q6UY18 593 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 TMC6Q7Z403 805 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 IRF2BP1Q8IU81 584 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 TMIEQ8NEW7 156 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 HDAC8Q9BY41 377 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 GTPBP4Q9BZE4 634 aaKnown RBP11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 NLGN3Q9NZ94 848 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ACTL7AQ9Y615 435 aa11.3□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 DRGXA6NNA5 263 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 K7ESM1 405 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ERVH48-1M5A8F1 160 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 SCAMP1O15126 338 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 MED7O43513 233 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 BNIP3LO60238 219 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 CSO75390 466 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 SLC2A3P11169 496 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 NME1P15531 152 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 TGM2P21980 687 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 OXCT1P55809 520 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 PCBP4P57723 403 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 GABREP78334 506 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ARF5P84085 180 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 E2F1Q01094 437 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 CFHR1Q03591 330 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 NME3Q13232 169 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF542PQ5EBM4 170 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 DPY19L3Q6ZPD9 716 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ERN2Q76MJ5 926 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 PARS2Q7L3T8 475 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF248Q8NDW4 579 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF548Q8NEK5 533 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 GRIN3AQ8TCU5 1115 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 PGAP3Q96FM1 320 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 NAF1Q96HR8 494 aaKnown RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 ZNF578Q96N58 590 aaPredicted RBP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 CALN1Q9BXU9 219 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 TNKS2Q9H2K2 1166 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
EXOSC1-204ENST00000370902 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 A6NNZ2 444 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 M0QYT0 321 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 USP12O75317 370 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 LEFTY1O75610 366 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 RHOCP08134 193 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ADRB3P13945 408 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 NOS2P35228 1153 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 CLCN1P35523 988 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 PPP1R2P41236 205 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ABL2P42684 1182 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 LSSP48449 732 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 NUCB2P80303 420 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 DAB2P98082 770 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 SLC6A3Q01959 620 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 CETN1Q12798 172 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 PAK1Q13153 545 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 STIM1Q13586 685 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 DRAP1Q14919 205 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ISXQ2M1V0 245 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 EFHC1Q5JVL4 640 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 PERM1Q5SV97 790 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 GUSBP11Q6P575 273 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 SETD3Q86TU7 594 aaPredicted RBP11.28□□□□□ -0.6
EXOSC1-204ENST00000370902 ATP11CQ8NB49 1132 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms