RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DCUN1D5Q9BTE7 237 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 PACSIN3Q9UKS6 424 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 HEY1Q9Y5J3 304 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TRIM24O15164 1050 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CABYRO75952 493 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 HMGCRP04035 888 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CD19P15391 556 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 IL4RP24394 825 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 DPP6P42658 865 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ASPAP45381 313 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 LIMK2P53671 638 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ZNF394Q53GI3 561 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 FKBP1CQ5VVH2 108 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 FAM83AQ86UY5 434 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CDCA5Q96FF9 252 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 QKIQ96PU8 341 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 HAPLN2Q9GZV7 340 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 FAM124BQ9H5Z6 455 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 VRTNQ9H8Y1 702 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 NMRAL1Q9HBL8 299 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 MRM3Q9HC36 420 aaKnown RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TRPC7Q9HCX4 862 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 C20orf96Q9NUD7 363 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TMEM98Q9Y2Y6 226 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 SNX13Q9Y5W8 968 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 WDR27A2RRH5 827 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TCAF2A6NFQ2 919 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TIMM44O43615 452 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ATE1O95260 518 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 MPP1Q00013 466 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 GALNT2Q10471 571 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TUBA3CQ13748 450 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TNFAIP1Q13829 316 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 SAMD4BQ5PRF9 694 aaKnown RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 FAM102AQ5T9C2 384 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 HEATR6Q6AI08 1181 aaKnown RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CASC4Q6P4E1 433 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 MOB2Q70IA6 237 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ERMP1Q7Z2K6 904 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ANKRD13AQ8IZ07 590 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CERS2Q96G23 380 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 GATA5Q9BWX5 397 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 TRIM15Q9C019 465 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 ADA2Q9NZK5 511 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 SEPT9Q9UHD8 586 aaPredicted RBP16.15■□□□□ 0.18
SCLT1-208ENST00000506368 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
SCLT1-208ENST00000506368 EMC2Q15006 297 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 MTX3Q5HYI7 312 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ZYG11AQ6WRX3 759 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ZNF786Q8N393 782 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PCYOX1LQ8NBM8 494 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 AFG1LQ8WV93 481 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 TMA16Q96EY4 203 aaKnown RBP16.14■□□□□ 0.17
SCLT1-208ENST00000506368 MAELQ96JY0 434 aaKnown RBP16.14■□□□□ 0.17
SCLT1-208ENST00000506368 TSNARE1Q96NA8 513 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PSD2Q9BQI7 771 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 C9orf16Q9BUW7 83 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PORCNQ9H237 461 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 SPAG4Q9NPE6 437 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ANLNQ9NQW6 1124 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 RIC8BQ9NVN3 520 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PCDHGA7Q9Y5G6 932 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 CEP350Q5VT06 3117 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 TFEBP19484 476 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 CCNA2P20248 432 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 FUT4P22083 530 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 JAK1P23458 1154 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 CSE1LP55060 971 aaKnown RBP16.14■□□□□ 0.17
SCLT1-208ENST00000506368 NR1D2Q14995 579 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 INAQ16352 499 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ANKRD26P1Q6NSI1 321 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 NAPRTQ6XQN6 538 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PCDH19Q8TAB3 1148 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ACER1Q8TDN7 264 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 SEPT8Q92599 483 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 FAR2Q96K12 515 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 ADI1Q9BV57 179 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 FTHL17Q9BXU8 183 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 SUN2Q9UH99 717 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 CDC14AQ9UNH5 594 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 DOLKQ9UPQ8 538 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 TSC22D4Q9Y3Q8 395 aa16.14■□□□□ 0.17
SCLT1-208ENST00000506368 A0A0A0MRY4 1105 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 NFIBO00712 420 aa16.13■□□□□ 0.17
SCLT1-208ENST00000506368 GRID2O43424 1007 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms