RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 COQ6Q9Y2Z9 468 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 COPG1Q9Y678 874 aaKnown RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 C9IYK1 514 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MSCO60682 206 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 EPHX2P34913 555 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ETFBP38117 255 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 RXRGP48443 463 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 NAGLUP54802 743 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 BTG3Q14201 252 aaPredicted RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 TMEM192Q8IY95 271 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 FAM110BQ8TC76 370 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SLCO4A1Q96BD0 722 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 APBA2Q99767 749 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SEPT10Q9P0V9 454 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 RAP2CQ9Y3L5 183 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MAFBQ9Y5Q3 323 aaPredicted RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 PTPRFP10586 1907 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 E7ENX8 843 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 CYP3A5P20815 502 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 GLRBP48167 497 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 OXCT1P55809 520 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 C4orf22Q6V702 233 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 RNF149Q8NC42 400 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 VPS50Q96JG6 964 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 PCYT2Q99447 389 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 TMEM134Q9H6X4 195 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SIX4Q9UIU6 781 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 CDYLQ9Y232 598 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 FUOMA2VDF0 154 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 FBP2O00757 339 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 C2P06681 752 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 OCM2P0CE71 109 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 OCMP0CE72 109 aaPredicted RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 TUBA4AP68366 448 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MTA1Q13330 715 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ATP1A4Q13733 1029 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MAP1SQ66K74 1059 aaPredicted RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 HMBOX1Q6NT76 420 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ZBTB49Q6ZSB9 765 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SETD3Q86TU7 594 aaPredicted RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 HTR3CQ8WXA8 447 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SREK1Q8WXA9 508 aaKnown RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ASB9Q96DX5 294 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ZNF670Q9BS34 389 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MRPL4Q9BYD3 311 aaKnown RBP20.62■□□□□ 0.89
SHOX2-203ENST00000441443 ZNF385DQ9H6B1 395 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 MORF4L1Q9UBU8 362 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 SLC8A2Q9UPR5 921 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 CSADQ9Y600 493 aa20.62■□□□□ 0.89
SHOX2-203ENST00000441443 TMEM233B4DJY2 109 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 GIPC1O14908 333 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 USP12O75317 370 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 ARSAP15289 507 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 HDCP19113 662 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 CD247P20963 164 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 SDC4P31431 198 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 PSME3P61289 254 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 TRIM25Q14258 630 aaKnown RBP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 SCUBE3Q8IX30 993 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 CPSF7Q8N684 471 aaKnown RBP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 C12orf29Q8N999 325 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 LPGAT1Q92604 370 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 ABHD8Q96I13 439 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 RBBP8Q99708 897 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 CPNE1Q99829 537 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 OXSMQ9NWU1 459 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 DUS2Q9NX74 493 aaKnown RBP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 DTLQ9NZJ0 730 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 A0A1W2PPW3 197 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 TIPRLO75663 272 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 BMP10O95393 424 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 ZBTB11O95625 1053 aaPredicted RBP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 IGBP1P78318 339 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 HSDL1Q3SXM5 330 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 GRTP1Q5TC63 336 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 ZPBP2Q6X784 338 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 QKIQ96PU8 341 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHOX2-203ENST00000441443 BCO2Q9BYV7 579 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 VPS45Q9NRW7 570 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 NRBP2Q9NSY0 501 aa20.61■□□□□ 0.89
SHOX2-203ENST00000441443 SOCS2O14508 198 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 CILPO75339 1184 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 FUCA1P04066 466 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 POLBP06746 335 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 MCF2P10911 925 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 HMOX2P30519 316 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 GRM1Q13255 1194 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 SNX31Q8N9S9 440 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 FAM49BQ9NUQ9 324 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 PCDHGA7Q9Y5G6 932 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 PHIPQ8WWQ0 1821 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 TADA2AO75478 443 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 CXCL8P10145 99 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 PSMB4P28070 264 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 GABRB3P28472 473 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 HALP42357 657 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 ZBED5Q49AG3 693 aa20.6■□□□□ 0.89
SHOX2-203ENST00000441443 DCAF6Q58WW2 860 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms