RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PRLRP16471 622 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 CKMT2P17540 419 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 CXCR3P49682 368 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 IRAK1P51617 712 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 METAP1P53582 386 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ATP11AP98196 1134 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 SEMG2Q02383 582 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ALFQ53S48 1182 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 HES3Q5TGS1 186 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 RWDD4Q6NW29 188 aaKnown RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 PDZD3Q86UT5 571 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 FAM71AQ8IYT1 594 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 NPY6RQ99463 290 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ZYG11BQ9C0D3 744 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 ARHGEF38Q9NXL2 777 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 AJAP1Q9UKB5 411 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 CHD6Q8TD26 2715 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 K7ERQ8 282 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 FFAR2O15552 330 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 MT-CO1P00395 513 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 DESP17661 470 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 HNRNPA2B1P22626 353 aaKnown RBP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ETFBP38117 255 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ABCG1P45844 678 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 RXRGP48443 463 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 NEK3P51956 506 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 SLC20A2Q08357 652 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 TARDBPQ13148 414 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 SGCGQ13326 291 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ILKQ13418 452 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 POLD3Q15054 466 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 CDO1Q16878 200 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 C22orf39Q6P5X5 142 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ERN2Q76MJ5 926 aaKnown RBP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 HORMAD1Q86X24 394 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 FAM131BQ86XD5 332 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 OR7D4Q8NG98 312 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 OR52K2Q8NGK3 314 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 CPA5Q8WXQ8 436 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 BAP1Q92560 729 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ALG14Q96F25 216 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 ABCG4Q9H172 646 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
TRAF4-202ENST00000262396 CA5BQ9Y2D0 317 aa12.52□□□□□ -0.41
TRAF4-202ENST00000262396 A0A0D9SEW6 157 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 ILVBLA1L0T0 632 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 ANKRD62A6NC57 917 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 NEMP2A6NFY4 417 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 GFPT2O94808 682 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 UCHL3P15374 230 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 TFE3P19532 575 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-202ENST00000262396 GLDCP23378 1020 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 EEF1GP26641 437 aaKnown RBP12.51□□□□□ -0.41
TRAF4-202ENST00000262396 SDC4P31431 198 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 SCNN1AP37088 669 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 CLDN6P56747 220 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
TRAF4-202ENST00000262396 E2F1Q01094 437 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 SHBQ15464 509 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 ZNF783Q6ZMS7 281 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 TMC6Q7Z403 805 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 PHLDB2Q86SQ0 1253 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
TRAF4-202ENST00000262396 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 CHST14Q8NCH0 376 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 PGAP3Q96FM1 320 aaPredicted RBP12.51□□□□□ -0.41
TRAF4-202ENST00000262396 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 HEPHQ9BQS7 1158 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 STK33Q9BYT3 514 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 ZDHHC6Q9H6R6 413 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
TRAF4-202ENST00000262396 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms