RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ENO4A6NNW6 628 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 USP12O75317 370 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 BBOX1O75936 387 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 SLU7O95391 586 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 FGBP02675 491 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 IL1R1P14778 569 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 RHCEP18577 417 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ATP5F1P24539 256 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ADRA1DP25100 572 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 SLC8A1P32418 973 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 MAN1A1P33908 653 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 CCT4P50991 539 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 CLNS1AP54105 237 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 TXNL4AP83876 142 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 RHDQ02161 417 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 NUCB1Q02818 461 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ZBTB17Q13105 803 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 STK3Q13188 491 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 EIF4A2Q14240 407 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 WTAPQ15007 396 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 PLCB4Q15147 1175 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 USH1GQ495M9 461 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 Q4G0T1 1027 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF772Q68DY9 489 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 PLAG1Q6DJT9 500 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 CCDC174Q6PII3 467 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 SLC30A9Q6PML9 568 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 LRRC31Q6UY01 552 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 KCTD20Q7Z5Y7 419 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 KRT78Q8N1N4 520 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 C12orf76Q8N812 135 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ZNF366Q8N895 744 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 NEK11Q8NG66 645 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 OR8K1Q8NGG5 319 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 MAFAQ8NHW3 353 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 TAF4BQ92750 862 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 LRRC45Q96CN5 670 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 GSDMAQ96QA5 445 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 HIST1H2AAQ96QV6 131 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 TCHPQ9BT92 498 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 EFHD1Q9BUP0 239 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 CINPQ9BW66 212 aaPredicted RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 TRIM4Q9C037 500 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 BRD8Q9H0E9 1235 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 IL20Q9NYY1 176 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 SEPT10Q9P0V9 454 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 NRBP1Q9UHY1 535 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ACAD8Q9UKU7 415 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 RIMKLBQ9ULI2 386 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 PAIP2BQ9ULR5 123 aaKnown RBP4.56□□□□□ -1.68
ITGB1-219ENST00000534049 SCINQ9Y6U3 715 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 NRKQ7Z2Y5 1582 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 RALGAPBQ86X10 1494 aa4.56□□□□□ -1.68
ITGB1-219ENST00000534049 ANKRD36BQ8N2N9 1353 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 NPHP3Q7Z494 1330 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ERICH2A1L162 156 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 POLR3GO15318 223 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 P4HA2O15460 535 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TTI1O43156 1089 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 THAP12O43422 761 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 PLIN1O60240 522 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 STAM2O75886 525 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TMEM191BP0C7N4 346 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 PNMA6AP0CW24 399 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TROVE2P10155 538 aaKnown RBP eCLIP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 HGFP14210 728 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 BTF3P20290 206 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 SFPQP23246 707 aaKnown RBP eCLIP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 CCNCP24863 283 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 CCT6AP40227 531 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 RANBP1P43487 201 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 FNTAP49354 379 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ITGA8P53708 1063 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 CSE1LP55060 971 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 EIF4A1P60842 406 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ZBED6P86452 979 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 HSF1Q00613 529 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 NSUN2Q08J23 767 aaKnown RBP eCLIP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 SEMA5AQ13591 1074 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 GRM3Q14832 879 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 NAA16Q6N069 864 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 PACS1Q6VY07 963 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 DEF8Q6ZN54 512 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 UNC13DQ70J99 1090 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 SESTD1Q86VW0 696 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 LIX1LQ8IVB5 337 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 RPAP2Q8IXW5 612 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TTC30BQ8N4P2 665 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 CEP112Q8N8E3 955 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 TRIML1Q8N9V2 468 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 MBD3L2Q8NHZ7 208 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 NEK9Q8TD19 979 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 SMARCE1Q969G3 411 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 COQ8BQ96D53 544 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ZC3H10Q96K80 434 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 ZMAT2Q96NC0 199 aaKnown RBP4.55□□□□□ -1.68
ITGB1-219ENST00000534049 PAGR1Q9BTK6 254 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms