RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ABHD10Q9NUJ1 306 aa13.76□□□□□ -0.21
ACTN4-205ENST00000477174 VPS51Q9UID3 782 aa13.76□□□□□ -0.21
ACTN4-205ENST00000477174 NENFQ9UMX5 172 aa13.76□□□□□ -0.21
ACTN4-205ENST00000477174 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
ACTN4-205ENST00000477174 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 CBX4O00257 560 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 SNAP91O60641 907 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 MFAP3LO75121 409 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 ZMPSTE24O75844 475 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 MT-CO1P00395 513 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 MIPP30301 263 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 GALCP54803 685 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 ADKP55263 362 aaKnown RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 GFPT1Q06210 699 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 ZNF252P-AS1Q0IIN9 211 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 SEMA3BQ13214 749 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 CST6Q15828 149 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 BOLA3Q53S33 107 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 PRR23CQ6ZRP0 262 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 STK40Q8N2I9 435 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 RTL3Q8N8U3 475 aaKnown RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 ATP11CQ8NB49 1132 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 OR7D4Q8NG98 312 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 PIGKQ92643 395 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 PABPC3Q9H361 631 aaKnown RBP13.75□□□□□ -0.21
ACTN4-205ENST00000477174 DEF6Q9H4E7 631 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 CATSPERBQ9H7T0 1116 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 SGK2Q9HBY8 427 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 CD93Q9NPY3 652 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 PCSK1NQ9UHG2 260 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 IP6K2Q9UHH9 426 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 PILRBQ9UKJ0 227 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 NCKAP1Q9Y2A7 1128 aa13.75□□□□□ -0.21
ACTN4-205ENST00000477174 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 METTL12A8MUP2 240 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 MYO1FO00160 1098 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 MCF2LO15068 1137 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ALOX15BO15296 676 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 FGF10O15520 208 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 CREB3O43889 395 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 AKR1B10O60218 316 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 RAMP2O60895 175 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 LRCH4O75427 683 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ADH1BP00325 375 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 H2AFZP0C0S5 128 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 SRCP12931 536 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 C5AR1P21730 350 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ITPKAP23677 461 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 SLC8A1P32418 973 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 NUMBP49757 651 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 YBEYP58557 167 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 POLD3Q15054 466 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 FAM46CQ5VWP2 391 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 PEAR1Q5VY43 1037 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 IL31Q6EBC2 164 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 H2AFVQ71UI9 128 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 RABEPKQ7Z6M1 372 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 MMAAQ8IVH4 418 aaKnown RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 DEFB119Q8N690 84 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 NIPA2Q8N8Q9 360 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 OR8D1Q8WZ84 308 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ARHGEF2Q92974 986 aaKnown RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 CCDC114Q96M63 670 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 BTBD1Q9H0C5 482 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 ATP13A1Q9HD20 1204 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 NDFIP2Q9NV92 336 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 DNAI1Q9UI46 699 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 PPM1HQ9ULR3 514 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-205ENST00000477174 EML5Q05BV3 1969 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
ACTN4-205ENST00000477174 CKAP5Q14008 2032 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 KHNYNO15037 678 aaKnown RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 VAV1P15498 845 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 ACVRL1P37023 503 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 HCAR3P49019 387 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 TPI1P60174 286 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 SF3A2Q15428 464 aaKnown RBP13.73□□□□□ -0.21
ACTN4-205ENST00000477174 CCDC6Q16204 474 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 FAM124AQ86V42 546 aa13.73□□□□□ -0.21
ACTN4-205ENST00000477174 CACUL1Q86Y37 369 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms