RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TMEM191CA6NGB0 347 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 CBX4O00257 560 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 CBFA2T2O43439 604 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 SMAD6O43541 496 aaKnown RBP13.96□□□□□ -0.17
SNX3-204ENST00000426155 CREB3O43889 395 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 BNIP3LO60238 219 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 TPM3P06753 285 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 ACVRL1P37023 503 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.17
SNX3-204ENST00000426155 GNA12Q03113 381 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 ARID5BQ14865 1188 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 CST6Q15828 149 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 CA9Q16790 459 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 ACCSLQ4AC99 568 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 TRIM61Q5EBN2 209 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 SPECC1LQ69YQ0 1117 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 PPP1R2P3Q6NXS1 205 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 VSTM4Q8IW00 320 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 DCAF4L2Q8NA75 395 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 ARHGEF26Q96DR7 871 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 THAP2Q9H0W7 228 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
SNX3-204ENST00000426155 C6orf106Q9H6K1 298 aaPredicted RBP13.96□□□□□ -0.17
SNX3-204ENST00000426155 FBRSQ9HAH7 460 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 TMEM51Q9NW97 253 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 PCSK1NQ9UHG2 260 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 CDV3Q9UKY7 258 aaKnown RBP13.96□□□□□ -0.17
SNX3-204ENST00000426155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNX3-204ENST00000426155 SLCO1B1Q9Y6L6 691 aa13.96□□□□□ -0.17
SNX3-204ENST00000426155 A0A1W2PP55 124 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 MEI4A8MW99 385 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 RNF103O00237 685 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 PLK4O00444 970 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ATP9BO43861 1147 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 TCF4P15884 667 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 RHOQP17081 205 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 NNMTP40261 264 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 IRX4P78413 519 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ARF5P84085 180 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 DLG2Q15700 870 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 POM121L1PQ3SYA9 428 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 SPDYCQ5MJ68 293 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ACBD5Q5T8D3 534 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 DCAF12L1Q5VU92 463 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 PEAR1Q5VY43 1037 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 CYP4V2Q6ZWL3 525 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 RGL4Q8IZJ4 473 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 AADATQ8N5Z0 425 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 IQCDQ96DY2 449 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ZNF419Q96HQ0 510 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 SNRNP25Q9BV90 132 aaKnown RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 EDEM2Q9BV94 578 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 C2orf49Q9BVC5 232 aaPredicted RBP13.95□□□□□ -0.18
SNX3-204ENST00000426155 TNKS2Q9H2K2 1166 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 ATP13A1Q9HD20 1204 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 DLL3Q9NYJ7 618 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 AP4E1Q9UPM8 1137 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 SCINQ9Y6U3 715 aa13.95□□□□□ -0.18
SNX3-204ENST00000426155 CACNA1AO00555 2505 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 PRR5-ARHGAP8B1AHC4 643 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 KHNYNO15037 678 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 LRCH4O75427 683 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 RNASEH2AO75792 299 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 ZMPSTE24O75844 475 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 IL1BP01584 269 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 CFIP05156 583 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 EPHB2P29323 1055 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 OXTRP30559 389 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 L1CAMP32004 1257 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 SLC8A1P32418 973 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 EIF4A3P38919 411 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 KRT83P78385 493 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 ARHGAP8P85298 464 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 ZBTB16Q05516 673 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 ELAVL3Q14576 367 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 IL31Q6EBC2 164 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 VPS36Q86VN1 386 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 ATP11CQ8NB49 1132 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 NETO1Q8TDF5 533 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 GANCQ8TET4 914 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 SNX19Q92543 992 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 TRIM11Q96F44 468 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 PACSIN1Q9BY11 444 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 NOL6Q9H6R4 1146 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 ABHD10Q9NUJ1 306 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 FBXL12Q9NXK8 326 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 SARDHQ9UL12 918 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms