RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SOCS2O14508 198 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 E2F6O75461 281 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 PIGRP01833 764 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TNNC2P02585 160 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 IDO1P14902 403 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 PGAM1P18669 254 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 GLRA4Q5JXX5 417 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 RDM1Q8NG50 284 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TBC1D15Q8TC07 691 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 LGMNQ99538 433 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 UNKQ9C0B0 810 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 SCAF8Q9UPN6 1271 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 RAP2CQ9Y3L5 183 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TMEM114B3SHH9 223 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 USP12O75317 370 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ARSAP15289 507 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 GPD2P43304 727 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 EIF2B2P49770 351 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 AP3M2P53677 418 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ATXN1P54253 815 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 CBLBQ13191 982 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 SEMA5AQ13591 1074 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 LRRC8EQ6NSJ5 796 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 HMBOX1Q6NT76 420 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 CHSY3Q70JA7 882 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 LYSMD3Q7Z3D4 306 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ACVR1CQ8NER5 493 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TRPC4APQ8TEL6 797 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 CERS2Q96G23 380 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TASP1Q9H6P5 420 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 RPF2Q9H7B2 306 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ZBTB26Q9HCK0 441 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 PLA2G6O60733 806 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 C2P06681 752 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 KCNA2P16389 499 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF24P17028 368 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 PMS2P3Q13401 168 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 TRIM50Q86XT4 487 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 CCNYL1Q8N7R7 359 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF669Q96BR6 464 aaPredicted RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 SLX1AQ9BQ83 275 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 NEURL2Q9BR09 285 aa13.26□□□□□ -0.29
TVP23A-201ENST00000299866 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 GMPR2Q9P2T1 348 aaKnown RBP13.26□□□□□ -0.29
TVP23A-201ENST00000299866 H3BMQ9 156 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 GOLGA8TH3BQL2 631 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 TPST1O60507 370 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CDH3P22223 829 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CCND2P30279 289 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 ITGADQ13349 1161 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CAPSQ13938 189 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 PITRM1Q5JRX3 1037 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 TREML2Q5T2D2 321 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 COG8Q96MW5 612 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 FCRL3Q96P31 734 aaPredicted RBP13.25□□□□□ -0.29
TVP23A-201ENST00000299866 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 PRDM16Q9HAZ2 1276 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CNOT6Q9ULM6 557 aaKnown RBP13.25□□□□□ -0.29
TVP23A-201ENST00000299866 TSC22D4Q9Y3Q8 395 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CCDC78A2IDD5 438 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 FAM149AA5PLN7 773 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 POLBP06746 335 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 SPRP35270 261 aaPredicted RBP13.25□□□□□ -0.29
TVP23A-201ENST00000299866 GJA8P48165 433 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 RHDQ02161 417 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 TRAF2Q12933 501 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 NME3Q13232 169 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 NEDD8Q15843 81 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 GRTP1Q5TC63 336 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 CYS1Q717R9 158 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
TVP23A-201ENST00000299866 ANKRD60Q9BZ19 345 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 BRD8Q9H0E9 1235 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 FAM49BQ9NUQ9 324 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 AURKCQ9UQB9 309 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 PCDHGA7Q9Y5G6 932 aa13.25□□□□□ -0.29
TVP23A-201ENST00000299866 NRP1O14786 923 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 ZNF12P17014 697 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 GABRB3P28472 473 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 SDC4P31431 198 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 GNA12Q03113 381 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 PRKCQQ04759 706 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 NR1D2Q14995 579 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 CHST15Q7LFX5 561 aaPredicted RBP13.24□□□□□ -0.29
TVP23A-201ENST00000299866 VSIG10LQ86VR7 867 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 URGCPQ8TCY9 931 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 CYGBQ8WWM9 190 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 HTR3CQ8WXA8 447 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 TMEM176AQ96HP8 235 aa13.24□□□□□ -0.29
TVP23A-201ENST00000299866 HEPHQ9BQS7 1158 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms