RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CITED4Q96RK1 184 aa7.23□□□□□ -1.25
CNOT1-216ENST00000569240 RTFDC1Q9BY42 306 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-216ENST00000569240 FAM124BQ9H5Z6 455 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-216ENST00000569240 NCAM1P13591 858 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ITGA4P13612 1032 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SLC7A1P30825 629 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 RPA3P35244 121 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 OR2B6P58173 313 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 GTF2IP78347 998 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CCNA1P78396 465 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SP4Q02446 784 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 USP39Q53GS9 565 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FAXCQ5TGI0 409 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 C16orf46Q6P387 395 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 PKN3Q6P5Z2 889 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 NIM1KQ8IY84 436 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 NODALQ96S42 347 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SP110Q9HB58 689 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 AGPAT3Q9NRZ7 376 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF451Q9Y4E5 1061 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TET3O43151 1660 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 BPGMP07738 259 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SLC2A3P11169 496 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FBLN1P23142 703 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 RBL1P28749 1068 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 HIST2H2ACQ16777 129 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 HIST2H2AA3Q6FI13 130 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TMC7Q7Z402 723 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CHPFQ8IZ52 775 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ATPAF2Q8N5M1 289 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SLC25A41Q8N5S1 370 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 MCEEQ96PE7 176 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 REEP2Q9BRK0 252 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CLPBQ9H078 707 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 KLHL28Q9NXS3 571 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TAS2R7Q9NYW3 318 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 USP31Q70CQ4 1352 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SUPT3HB4E1H0 165 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TEX46H3BTG2 121 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 VAPBO95292 243 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ARIH2O95376 493 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 PGK2P07205 417 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FLT3P36888 993 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ELK3P41970 407 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 OXCT1P55809 520 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CXXC5Q7LFL8 322 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CACTIN-AS1Q8N1I8 211 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ANKRD52Q8NB46 1076 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF540Q8NDQ6 660 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 RBM15BQ8NDT2 890 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 MOSPD2Q8NHP6 518 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CLPTM1LQ96KA5 538 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ARL8BQ9NVJ2 186 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 GMIPQ9P107 970 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 PRKAG3Q9UGI9 489 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 COL15A1P39059 1388 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF806P0C7X5 589 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 PSMA1P25786 263 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 RPS9P46781 194 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CDH17Q12864 832 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 DLG1Q12959 904 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FSCN1Q16658 493 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 STRIP1Q5VSL9 837 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 LAYNQ6UX15 382 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TMPRSS11AQ6ZMR5 421 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SPATA19Q7Z5L4 167 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZZZ3Q8IYH5 903 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF317Q96PQ6 595 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 MMTAG2Q9BU76 263 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 DGCR6LQ9BY27 220 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 TMEM168Q9H0V1 697 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FEM1BQ9UK73 627 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 NFAT5O94916 1531 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 LINGO3P0C6S8 592 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 NPTX2P47972 431 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ALDH9A1P49189 494 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CCR3P51677 355 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 EIF6P56537 245 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 FOXM1Q08050 763 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 LLGL1Q15334 1064 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 NFIL3Q16649 462 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 KHDC1Q4VXA5 237 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 PAGE2BQ5JRK9 111 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 THEM5Q8N1Q8 247 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CENPSQ8N2Z9 138 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 COA7Q96BR5 231 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 AGAP3Q96P47 875 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ADI1Q9BV57 179 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 XKR8Q9H6D3 395 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ARMC7Q9H6L4 198 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 SAMD4AQ9UPU9 718 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 RUVBL2Q9Y230 463 aaKnown RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 KCNE2Q9Y6J6 123 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 USP32Q8NFA0 1604 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CCDC189A1A4V9 331 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 CYP19A1P11511 503 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ALAS1P13196 640 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 KLF10Q13118 480 aa7.22□□□□□ -1.25
CNOT1-216ENST00000569240 ZNF235Q14590 738 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms