RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CEACAM7Q14002 265 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 PAFAH1B3Q15102 231 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 FSTL4Q6MZW2 842 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 LILRA2Q8N149 483 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 NUP93Q8N1F7 819 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 PLD6Q8N2A8 252 aaKnown RBP11.65□□□□□ -0.54
CAPN9-202ENST00000354537 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 WDR41Q9HAD4 459 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 ZBTB26Q9HCK0 441 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 FZD10Q9ULW2 581 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 DERAQ9Y315 318 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 CEPT1Q9Y6K0 416 aa11.65□□□□□ -0.54
CAPN9-202ENST00000354537 GRID2O43424 1007 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 TRMUO75648 421 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 GABBR2O75899 941 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 C2P06681 752 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CDK4P11802 303 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 DNAJB2P25686 324 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ALDH3B2P48448 385 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 NPY2RP49146 381 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CRADDP78560 199 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 TRAP1Q12931 704 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ART3Q13508 389 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 AMHR2Q16671 573 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 SH3D19Q5HYK7 790 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CROCCP3Q8IVE0 287 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CHERPQ8IWX8 916 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 BHLHE22Q8NFJ8 381 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 RIN3Q8TB24 985 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ZNF597Q96LX8 424 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CNBD2Q96M20 576 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 BIRC8Q96P09 236 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MPHOSPH6Q99547 160 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 PKP2Q99959 881 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 OSBPL11Q9BXB4 747 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 QTRT2Q9H974 415 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 COPS7BQ9H9Q2 264 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MRM3Q9HC36 420 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CASS4Q9NQ75 786 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MAN1C1Q9NR34 630 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ZNF358Q9NW07 568 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 SUCOQ9UBS9 1254 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CDYLQ9Y232 598 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 SOWAHBA6NEL2 793 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 C8BP07358 591 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ZNF26P17031 533 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 PSMC3P17980 439 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CDH2P19022 906 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 TFEBP19484 476 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MLH1P40692 756 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MS4A2Q01362 244 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CELF3Q5SZQ8 465 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 DHRS4L2Q6PKH6 230 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 CMC1Q7Z7K0 106 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 TRIM50Q86XT4 487 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 TNS4Q8IZW8 715 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 C12orf29Q8N999 325 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 GAB3Q8WWW8 586 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 RCN3Q96D15 328 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ASB9Q96DX5 294 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 HSFY1Q96LI6 401 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 FCRL3Q96P31 734 aaPredicted RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 LGMNQ99538 433 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 PRPF18Q99633 342 aaKnown RBP11.64□□□□□ -0.55
CAPN9-202ENST00000354537 BRD8Q9H0E9 1235 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 MINDY3Q9H8M7 445 aa11.64□□□□□ -0.55
CAPN9-202ENST00000354537 ZCWPW2A0A1B0GU75 182 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 CCDC160A6NGH7 325 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 AP2A1O95782 977 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 GOT1P17174 413 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 PSMB4P28070 264 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 CDK9P50750 372 aaKnown RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 ANO4Q32M45 955 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 FAM182AQ5T1J6 154 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 PDZD4Q76G19 769 aaPredicted RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 ZNF567Q8N184 647 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 ANKRD52Q8NB46 1076 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 HM13Q8TCT9 377 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 TSNARE1Q96NA8 513 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 UHRF1Q96T88 793 aaPredicted RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 MRPL1Q9BYD6 325 aaKnown RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 ACE2Q9BYF1 805 aaPredicted RBP11.63□□□□□ -0.55
CAPN9-202ENST00000354537 LRRC4Q9HBW1 653 aa11.63□□□□□ -0.55
CAPN9-202ENST00000354537 DNAAF2Q9NVR5 837 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms