RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 GUP1P53154 560 aa8.96□□□□□ -0.98
snR78snR78 ALD3P54114 506 aa8.96□□□□□ -0.98
snR78snR78 GEF1P37020 779 aa8.95□□□□□ -0.98
snR78snR78 LEM3P42838 414 aa8.95□□□□□ -0.98
snR78snR78 SOG2Q08817 791 aa8.95□□□□□ -0.98
snR78snR78 ATG1P53104 897 aa8.94□□□□□ -0.98
snR78snR78 DSE4P53753 1117 aa8.94□□□□□ -0.98
snR78snR78 UFD2P54860 961 aa8.94□□□□□ -0.98
snR78snR78 TFA2P36145 328 aa8.93□□□□□ -0.98
snR78snR78 PAN5P38787 379 aa8.93□□□□□ -0.98
snR78snR78 ARI1P53111 347 aaKnown RBP8.93□□□□□ -0.98
snR78snR78 RSC6P25632 483 aa8.92□□□□□ -0.98
snR78snR78 ACF4P47129 309 aa8.92□□□□□ -0.98
snR78snR78 PYC2P32327 1180 aaKnown RBP8.91□□□□□ -0.98
snR78snR78 TY1A-NL1Q12391 440 aaKnown RBP8.9□□□□□ -0.98
snR78snR78 NEO1P40527 1151 aa8.89□□□□□ -0.99
snR78snR78 YJR124CP47159 448 aa8.89□□□□□ -0.99
snR78snR78 GLO4Q12320 285 aa8.88□□□□□ -0.99
snR78snR78 COQ2P32378 372 aa8.87□□□□□ -0.99
snR78snR78 YNR065CP53751 1116 aa8.87□□□□□ -0.99
snR78snR78 RSC4Q02206 625 aa8.87□□□□□ -0.99
snR78snR78 SPO71Q03868 1245 aa8.87□□□□□ -0.99
snR78snR78 GLT1Q12680 2145 aaKnown RBP8.86□□□□□ -0.99
snR78snR78 TRL1P09880 827 aaKnown RBP8.86□□□□□ -0.99
snR78snR78 GRS1P38088 690 aaKnown RBP8.86□□□□□ -0.99
snR78snR78 POL5P39985 1022 aaKnown RBP8.86□□□□□ -0.99
snR78snR78 TRS120Q04183 1289 aa8.86□□□□□ -0.99
snR78snR78 HAT1Q12341 374 aa8.86□□□□□ -0.99
snR78snR78 MAE1P36013 669 aaKnown RBP8.85□□□□□ -0.99
snR78snR78 ECM2P38241 364 aaKnown RBP8.85□□□□□ -0.99
snR78snR78 NRD1P53617 575 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
snR78snR78 YNL011CP53980 444 aa8.85□□□□□ -0.99
snR78snR78 YBL113CQ7M4S9 792 aa8.85□□□□□ -0.99
snR78snR78 PGM1P33401 570 aaKnown RBP8.84□□□□□ -0.99
snR78snR78 ERP5P38819 212 aa8.84□□□□□ -0.99
snR78snR78 CTR9P89105 1077 aa8.83□□□□□ -1
snR78snR78 HVG1P0CE11 249 aa8.82□□□□□ -1
snR78snR78 FET4P40988 552 aa8.82□□□□□ -1
snR78snR78 ALO1P54783 526 aaKnown RBP8.82□□□□□ -1
snR78snR78 HAS1Q03532 505 aaKnown RBP8.82□□□□□ -1
snR78snR78 ELG1Q12050 791 aa8.82□□□□□ -1
snR78snR78 MDJ2P42834 146 aa8.81□□□□□ -1
snR78snR78 KAE1P36132 386 aa8.8□□□□□ -1
snR78snR78 REC8Q12188 680 aa8.8□□□□□ -1
snR78snR78 MNL2Q12205 849 aa8.8□□□□□ -1
snR78snR78 MAC1P35192 417 aa8.79□□□□□ -1
snR78snR78 AKR1P39010 764 aa8.79□□□□□ -1
snR78snR78 BSC2Q05611 235 aa8.79□□□□□ -1
snR78snR78 NAM7P30771 971 aaKnown RBP8.78□□□□□ -1
snR78snR78 SAF1P38352 637 aa8.78□□□□□ -1
snR78snR78 CDC55Q00362 526 aa8.78□□□□□ -1
snR78snR78 COBP00163 385 aa8.77□□□□□ -1.01
snR78snR78 ERS1P17261 260 aa8.77□□□□□ -1.01
snR78snR78 YHL008CP38750 627 aa8.77□□□□□ -1.01
snR78snR78 FAR11P53917 953 aa8.77□□□□□ -1.01
snR78snR78 OMA1P36163 345 aa8.76□□□□□ -1.01
snR78snR78 KIP3P53086 805 aaKnown RBP8.76□□□□□ -1.01
snR78snR78 YLR122CQ12312 125 aa8.76□□□□□ -1.01
snR78snR78 CHS2P14180 963 aa8.75□□□□□ -1.01
snR78snR78 NCE103P53615 221 aa8.75□□□□□ -1.01
snR78snR78 NPR1P22211 790 aa8.74□□□□□ -1.01
snR78snR78 YMR074CQ04773 145 aa8.74□□□□□ -1.01
snR78snR78 NUT2Q06213 157 aa8.74□□□□□ -1.01
snR78snR78 PUF3Q07807 879 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
snR78snR78 FRT1Q99332 602 aa8.74□□□□□ -1.01
snR78snR78 DUR3P33413 735 aa8.73□□□□□ -1.01
snR78snR78 FLP1P03870 423 aa8.72□□□□□ -1.01
snR78snR78 RIM11P38615 370 aa8.72□□□□□ -1.01
snR78snR78 MED7Q08278 222 aa8.72□□□□□ -1.01
snR78snR78 CMR1Q12510 522 aaKnown RBP8.72□□□□□ -1.01
snR78snR78 TRP3P00937 484 aa8.71□□□□□ -1.02
snR78snR78 MSH6Q03834 1242 aa8.71□□□□□ -1.02
snR78snR78 YGR130CP53278 816 aa8.7□□□□□ -1.02
snR78snR78 GPI13Q07830 1017 aa8.7□□□□□ -1.02
snR78snR78 INP54Q08227 384 aaKnown RBP8.7□□□□□ -1.02
snR78snR78 INP52P50942 1183 aa8.69□□□□□ -1.02
snR78snR78 YOR223WQ12015 292 aa8.69□□□□□ -1.02
snR78snR78 YLL054CQ12244 843 aa8.69□□□□□ -1.02
snR78snR78 HTS1P07263 546 aaKnown RBP8.68□□□□□ -1.02
snR78snR78 PRP5P21372 849 aaPredicted RBP8.68□□□□□ -1.02
snR78snR78 NUT1P53114 1132 aa8.68□□□□□ -1.02
snR78snR78 TAF7Q05021 590 aa8.68□□□□□ -1.02
snR78snR78 GIC2Q06648 383 aa8.68□□□□□ -1.02
snR78snR78 NOC3Q07896 663 aaPredicted RBP8.68□□□□□ -1.02
snR78snR78 YKR073CP36153 106 aa8.67□□□□□ -1.02
snR78snR78 YHL050CP38721 697 aa8.67□□□□□ -1.02
snR78snR78 YHR219WP38900 624 aa8.67□□□□□ -1.02
snR78snR78 SAM37P50110 327 aa8.67□□□□□ -1.02
snR78snR78 PMT7Q06644 662 aa8.67□□□□□ -1.02
snR78snR78 YIG1Q08956 461 aa8.67□□□□□ -1.02
snR78snR78 GCV1P48015 400 aa8.66□□□□□ -1.02
snR78snR78 MCM5P29496 775 aaKnown RBP8.64□□□□□ -1.03
snR78snR78 TOS1P38288 455 aa8.64□□□□□ -1.03
snR78snR78 SSF1P38789 453 aaPredicted RBP8.64□□□□□ -1.03
snR78snR78 SAP155P43612 1002 aa8.64□□□□□ -1.03
snR78snR78 SPO74P45819 413 aa8.64□□□□□ -1.03
snR78snR78 MON1P53129 644 aa8.64□□□□□ -1.03
snR78snR78 UTP22P53254 1237 aaPredicted RBP8.64□□□□□ -1.03
snR78snR78 CYC7P00045 113 aa8.63□□□□□ -1.03
snR78snR78 MSB1P21339 1137 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms