RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ELG1Q12050 791 aa2.25□□□□□ -2.05
snR39BsnR39B GCD1P09032 578 aaPredicted RBP2.24□□□□□ -2.05
snR39BsnR39B PRP6P19735 899 aaPredicted RBP2.24□□□□□ -2.05
snR39BsnR39B HSP78P33416 811 aa2.24□□□□□ -2.05
snR39BsnR39B SIS2P36024 562 aa2.24□□□□□ -2.05
snR39BsnR39B SEA4P38164 1038 aa2.24□□□□□ -2.05
snR39BsnR39B YIL165CP40446 119 aa2.24□□□□□ -2.05
snR39BsnR39B BIO5P53744 561 aaKnown RBP2.24□□□□□ -2.05
snR39BsnR39B YLL054CQ12244 843 aa2.24□□□□□ -2.05
snR39BsnR39B TRS33Q99394 268 aa2.24□□□□□ -2.05
snR39BsnR39B TAD3Q9URQ3 322 aa2.24□□□□□ -2.05
snR39BsnR39B MRPL33P20084 86 aa2.23□□□□□ -2.05
snR39BsnR39B VMA3P25515 160 aa2.23□□□□□ -2.05
snR39BsnR39B PEP12P32854 288 aa2.23□□□□□ -2.05
snR39BsnR39B TSA1P34760 196 aaKnown RBP2.23□□□□□ -2.05
snR39BsnR39B RPL34BP40525 121 aaKnown RBP2.23□□□□□ -2.05
snR39BsnR39B ORC3P54790 616 aa2.23□□□□□ -2.05
snR39BsnR39B ENO1P00924 437 aaKnown RBP2.22□□□□□ -2.05
snR39BsnR39B ADP1P25371 1049 aa2.22□□□□□ -2.05
snR39BsnR39B THI80P35202 319 aa2.22□□□□□ -2.05
snR39BsnR39B FLR1P38124 548 aa2.22□□□□□ -2.05
snR39BsnR39B FIR1P40020 876 aa2.22□□□□□ -2.05
snR39BsnR39B YJL007CP47080 104 aa2.22□□□□□ -2.05
snR39BsnR39B HGH1P48362 394 aaKnown RBP2.22□□□□□ -2.05
snR39BsnR39B YNR065CP53751 1116 aa2.22□□□□□ -2.05
snR39BsnR39B RCM1P53972 490 aa2.22□□□□□ -2.05
snR39BsnR39B YOR223WQ12015 292 aa2.22□□□□□ -2.05
snR39BsnR39B LEU3P08638 886 aa2.21□□□□□ -2.06
snR39BsnR39B FUS1P11710 512 aa2.21□□□□□ -2.06
snR39BsnR39B NFS1P25374 497 aa2.21□□□□□ -2.06
snR39BsnR39B RTG2P32608 588 aaKnown RBP2.21□□□□□ -2.06
snR39BsnR39B BSD2P38356 321 aa2.21□□□□□ -2.06
snR39BsnR39B NEO1P40527 1151 aa2.21□□□□□ -2.06
snR39BsnR39B KIP3P53086 805 aaKnown RBP2.21□□□□□ -2.06
snR39BsnR39B YPT53P36019 220 aa2.2□□□□□ -2.06
snR39BsnR39B RIM8P53179 542 aa2.2□□□□□ -2.06
snR39BsnR39B ALD3P54114 506 aa2.2□□□□□ -2.06
snR39BsnR39B CAB1Q04430 367 aa2.2□□□□□ -2.06
snR39BsnR39B GAL2P13181 574 aa2.19□□□□□ -2.06
snR39BsnR39B ERS1P17261 260 aa2.19□□□□□ -2.06
snR39BsnR39B WHI3P34761 661 aaKnown RBP2.19□□□□□ -2.06
snR39BsnR39B BOI1P38041 980 aaKnown RBP2.19□□□□□ -2.06
snR39BsnR39B AIM46P38885 310 aa2.19□□□□□ -2.06
snR39BsnR39B ROM1P53046 1155 aa2.19□□□□□ -2.06
snR39BsnR39B YMR074CQ04773 145 aa2.19□□□□□ -2.06
snR39BsnR39B PNS1Q12412 539 aa2.19□□□□□ -2.06
snR39BsnR39B TIF1P10081 395 aaKnown RBP2.18□□□□□ -2.06
snR39BsnR39B MSN1P22148 382 aa2.18□□□□□ -2.06
snR39BsnR39B TFA2P36145 328 aa2.18□□□□□ -2.06
snR39BsnR39B ABZ1P37254 787 aaPredicted RBP2.18□□□□□ -2.06
snR39BsnR39B KTR7P40504 517 aa2.18□□□□□ -2.06
snR39BsnR39B FET4P40988 552 aa2.18□□□□□ -2.06
snR39BsnR39B OYE3P41816 400 aaPredicted RBP2.18□□□□□ -2.06
snR39BsnR39B FOX2Q02207 900 aaKnown RBP2.18□□□□□ -2.06
snR39BsnR39B SOD2P00447 233 aa2.17□□□□□ -2.06
snR39BsnR39B TUB2P02557 457 aaKnown RBP2.17□□□□□ -2.06
snR39BsnR39B GPT2P36148 743 aa2.17□□□□□ -2.06
snR39BsnR39B YJR124CP47159 448 aa2.17□□□□□ -2.06
snR39BsnR39B HAS1Q03532 505 aaKnown RBP2.17□□□□□ -2.06
snR39BsnR39B EMG1Q06287 252 aaKnown RBP2.17□□□□□ -2.06
snR39BsnR39B URN1Q06525 465 aaKnown RBP2.17□□□□□ -2.06
snR39BsnR39B TRE1Q08919 783 aa2.17□□□□□ -2.06
snR39BsnR39B AIM3P38266 947 aaKnown RBP2.16□□□□□ -2.06
snR39BsnR39B YBR197CP38306 217 aa2.16□□□□□ -2.06
snR39BsnR39B BIM1P40013 344 aa2.16□□□□□ -2.06
snR39BsnR39B GCV1P48015 400 aa2.16□□□□□ -2.06
snR39BsnR39B MRPL22P53881 309 aa2.16□□□□□ -2.06
snR39BsnR39B DOT1Q04089 582 aaKnown RBP2.16□□□□□ -2.06
snR39BsnR39B YLR358CO13565 187 aa2.15□□□□□ -2.07
snR39BsnR39B RPS4AP0CX35 261 aaKnown RBP2.15□□□□□ -2.07
snR39BsnR39B RPS4BP0CX36 261 aaKnown RBP2.15□□□□□ -2.07
snR39BsnR39B HXT8P40886 569 aa2.15□□□□□ -2.07
snR39BsnR39B FOL2P51601 243 aaKnown RBP2.15□□□□□ -2.07
snR39BsnR39B SSY1Q03770 852 aa2.15□□□□□ -2.07
snR39BsnR39B HVG1P0CE11 249 aa2.14□□□□□ -2.07
snR39BsnR39B PRO1P32264 428 aa2.14□□□□□ -2.07
snR39BsnR39B SUV3P32580 737 aa2.14□□□□□ -2.07
snR39BsnR39B ISC10P32645 267 aa2.14□□□□□ -2.07
snR39BsnR39B TOD6P34219 525 aa2.14□□□□□ -2.07
snR39BsnR39B ATG32P40458 529 aa2.14□□□□□ -2.07
snR39BsnR39B GLO4Q12320 285 aa2.14□□□□□ -2.07
snR39BsnR39B NTA1P40354 457 aa2.13□□□□□ -2.07
snR39BsnR39B ALT1P52893 592 aa2.13□□□□□ -2.07
snR39BsnR39B SNO2P53823 222 aa2.13□□□□□ -2.07
snR39BsnR39B CLU1Q03690 1277 aaKnown RBP2.13□□□□□ -2.07
snR39BsnR39B PUF6Q04373 656 aaKnown RBP2.13□□□□□ -2.07
snR39BsnR39B LPX1Q12405 387 aaKnown RBP2.13□□□□□ -2.07
snR39BsnR39B RPS13P05756 151 aaKnown RBP2.12□□□□□ -2.07
snR39BsnR39B SHM2P37291 469 aaKnown RBP2.12□□□□□ -2.07
snR39BsnR39B PEX7P39108 375 aa2.12□□□□□ -2.07
snR39BsnR39B ALD4P46367 519 aaKnown RBP2.12□□□□□ -2.07
snR39BsnR39B YIG1Q08956 461 aa2.12□□□□□ -2.07
snR39BsnR39B YVC1Q12324 675 aa2.12□□□□□ -2.07
snR39BsnR39B SMC1P32908 1225 aa2.11□□□□□ -2.07
snR39BsnR39B SMY2P32909 740 aaKnown RBP2.11□□□□□ -2.07
snR39BsnR39B IRS4P36115 615 aaKnown RBP2.11□□□□□ -2.07
snR39BsnR39B PTC7P38797 343 aa2.11□□□□□ -2.07
snR39BsnR39B MSH4P40965 878 aaPredicted RBP2.11□□□□□ -2.07
snR39BsnR39B ENV11P53246 860 aa2.11□□□□□ -2.07
snR39BsnR39B YPL277CQ08989 487 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms