RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	AKR1	P39010	764 aa		4.58	□□□□□ -1.68
YPR039W	YPR039W	YLR122C	Q12312	125 aa		4.58	□□□□□ -1.68
YPR039W	YPR039W	TIF6	Q12522	245 aa	Known RBP	4.58	□□□□□ -1.68
YPR039W	YPR039W	FUR4	P05316	633 aa	Known RBP	4.57	□□□□□ -1.68
YPR039W	YPR039W	KAE1	P36132	386 aa		4.57	□□□□□ -1.68
YPR039W	YPR039W	YKR073C	P36153	106 aa		4.57	□□□□□ -1.68
YPR039W	YPR039W	RAD55	P38953	406 aa		4.57	□□□□□ -1.68
YPR039W	YPR039W	DSE4	P53753	1117 aa		4.57	□□□□□ -1.68
YPR039W	YPR039W	LSO1	Q3E827	93 aa		4.57	□□□□□ -1.68
YPR039W	YPR039W	NTA1	P40354	457 aa		4.56	□□□□□ -1.68
YPR039W	YPR039W	FUS1	P11710	512 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	YBR287W	P38355	427 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	POL5	P39985	1022 aa	Known RBP	4.55	□□□□□ -1.68
YPR039W	YPR039W	YJR124C	P47159	448 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	YGR130C	P53278	816 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	SOG2	Q08817	791 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	REC8	Q12188	680 aa		4.55	□□□□□ -1.68
YPR039W	YPR039W	SAF1	P38352	637 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	PSY2	P40164	858 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	NEO1	P40527	1151 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	GUP1	P53154	560 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	YNR065C	P53751	1116 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YPR039W	YPR039W	MED7	Q08278	222 aa		4.54	□□□□□ -1.68
YPR039W	YPR039W	CHS2	P14180	963 aa		4.53	□□□□□ -1.68
YPR039W	YPR039W	PYC2	P32327	1180 aa	Known RBP	4.53	□□□□□ -1.68
YPR039W	YPR039W	IRS4	P36115	615 aa	Known RBP	4.53	□□□□□ -1.68
YPR039W	YPR039W	ERS1	P17261	260 aa		4.52	□□□□□ -1.69
YPR039W	YPR039W	MAE1	P36013	669 aa	Known RBP	4.52	□□□□□ -1.69
YPR039W	YPR039W	TOS1	P38288	455 aa		4.52	□□□□□ -1.69
YPR039W	YPR039W	CTH1	P47976	325 aa		4.52	□□□□□ -1.69
YPR039W	YPR039W	NCE103	P53615	221 aa		4.52	□□□□□ -1.69
YPR039W	YPR039W	LIP5	P32875	414 aa		4.51	□□□□□ -1.69
YPR039W	YPR039W	SMC1	P32908	1225 aa		4.51	□□□□□ -1.69
YPR039W	YPR039W	GLO3	P38682	493 aa	Known RBP	4.51	□□□□□ -1.69
YPR039W	YPR039W	KIP3	P53086	805 aa	Known RBP	4.51	□□□□□ -1.69
YPR039W	YPR039W	HAS1	Q03532	505 aa	Known RBP	4.51	□□□□□ -1.69
YPR039W	YPR039W	SPO71	Q03868	1245 aa		4.51	□□□□□ -1.69
YPR039W	YPR039W	ELG1	Q12050	791 aa		4.51	□□□□□ -1.69
YPR039W	YPR039W	GLO4	Q12320	285 aa		4.51	□□□□□ -1.69
YPR039W	YPR039W	LEM3	P42838	414 aa		4.5	□□□□□ -1.69
YPR039W	YPR039W	CTR9	P89105	1077 aa		4.5	□□□□□ -1.69
YPR039W	YPR039W	KAR5	Q04746	504 aa		4.5	□□□□□ -1.69
YPR039W	YPR039W	HVG1	P0CE11	249 aa		4.49	□□□□□ -1.69
YPR039W	YPR039W	QDR1	P40475	563 aa		4.49	□□□□□ -1.69
YPR039W	YPR039W	AVT1	P47082	602 aa		4.49	□□□□□ -1.69
YPR039W	YPR039W	CYC7	P00045	113 aa		4.48	□□□□□ -1.69
YPR039W	YPR039W	COB	P00163	385 aa		4.48	□□□□□ -1.69
YPR039W	YPR039W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
YPR039W	YPR039W	DUR3	P33413	735 aa		4.48	□□□□□ -1.69
YPR039W	YPR039W	BRE4	Q07660	1125 aa		4.48	□□□□□ -1.69
YPR039W	YPR039W	FET4	P40988	552 aa		4.47	□□□□□ -1.69
YPR039W	YPR039W	RPL34A	P87262	121 aa	Predicted RBP	4.47	□□□□□ -1.69
YPR039W	YPR039W	TAF7	Q05021	590 aa		4.47	□□□□□ -1.69
YPR039W	YPR039W	SEA4	P38164	1038 aa		4.46	□□□□□ -1.7
YPR039W	YPR039W	SPO74	P45819	413 aa		4.46	□□□□□ -1.7
YPR039W	YPR039W	YMR074C	Q04773	145 aa		4.46	□□□□□ -1.7
YPR039W	YPR039W	SDH1	Q00711	640 aa		4.45	□□□□□ -1.7
YPR039W	YPR039W	MAG2	Q06436	670 aa	Known RBP	4.45	□□□□□ -1.7
YPR039W	YPR039W	GIC2	Q06648	383 aa		4.45	□□□□□ -1.7
YPR039W	YPR039W	GCD1	P09032	578 aa	Predicted RBP	4.43	□□□□□ -1.7
YPR039W	YPR039W	MSB1	P21339	1137 aa	Known RBP	4.43	□□□□□ -1.7
YPR039W	YPR039W	GPT2	P36148	743 aa		4.43	□□□□□ -1.7
YPR039W	YPR039W	RSC4	Q02206	625 aa		4.43	□□□□□ -1.7
YPR039W	YPR039W	NPR1	P22211	790 aa		4.42	□□□□□ -1.7
YPR039W	YPR039W	RIM11	P38615	370 aa		4.42	□□□□□ -1.7
YPR039W	YPR039W	IRC24	P40580	263 aa		4.42	□□□□□ -1.7
YPR039W	YPR039W	FAR11	P53917	953 aa		4.42	□□□□□ -1.7
YPR039W	YPR039W	MNL2	Q12205	849 aa		4.42	□□□□□ -1.7
YPR039W	YPR039W	CMR1	Q12510	522 aa	Known RBP	4.42	□□□□□ -1.7
YPR039W	YPR039W	WHI3	P34761	661 aa	Known RBP	4.41	□□□□□ -1.7
YPR039W	YPR039W	ECM2	P38241	364 aa	Known RBP	4.41	□□□□□ -1.7
YPR039W	YPR039W	ATG1	P53104	897 aa		4.41	□□□□□ -1.7
YPR039W	YPR039W	YNL011C	P53980	444 aa		4.41	□□□□□ -1.7
YPR039W	YPR039W	UFD2	P54860	961 aa		4.41	□□□□□ -1.7
YPR039W	YPR039W	ALG6	Q12001	544 aa	Known RBP	4.41	□□□□□ -1.7
YPR039W	YPR039W	YOR223W	Q12015	292 aa		4.41	□□□□□ -1.7
YPR039W	YPR039W	TRL1	P09880	827 aa	Known RBP	4.4	□□□□□ -1.71
YPR039W	YPR039W	DOT1	Q04089	582 aa	Known RBP	4.4	□□□□□ -1.71
YPR039W	YPR039W	TRS120	Q04183	1289 aa		4.4	□□□□□ -1.71
YPR039W	YPR039W	HTS1	P07263	546 aa	Known RBP	4.39	□□□□□ -1.71
YPR039W	YPR039W	LRG1	P35688	1017 aa		4.39	□□□□□ -1.71
YPR039W	YPR039W	GRS1	P38088	690 aa	Known RBP	4.39	□□□□□ -1.71
YPR039W	YPR039W	ACF4	P47129	309 aa		4.39	□□□□□ -1.71
YPR039W	YPR039W	SSA1	P10591	642 aa	Known RBP	4.38	□□□□□ -1.71
YPR039W	YPR039W	YHL008C	P38750	627 aa		4.38	□□□□□ -1.71
YPR039W	YPR039W	ERP5	P38819	212 aa		4.38	□□□□□ -1.71
YPR039W	YPR039W	MDJ2	P42834	146 aa		4.38	□□□□□ -1.71
YPR039W	YPR039W	BSC2	Q05611	235 aa		4.38	□□□□□ -1.71
YPR039W	YPR039W	GPI13	Q07830	1017 aa		4.38	□□□□□ -1.71
YPR039W	YPR039W	FLP1	P03870	423 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	PRP5	P21372	849 aa	Predicted RBP	4.37	□□□□□ -1.71
YPR039W	YPR039W	RNQ1	P25367	405 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	MMM1	P41800	426 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	EAR1	Q03212	550 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	INP54	Q08227	384 aa	Known RBP	4.37	□□□□□ -1.71
YPR039W	YPR039W	YIG1	Q08956	461 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	FRT1	Q99332	602 aa		4.37	□□□□□ -1.71
YPR039W	YPR039W	SEG2	P34250	1132 aa		4.36	□□□□□ -1.71
YPR039W	YPR039W	GCV1	P48015	400 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms