RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	FAA4	P47912	694 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	NAN1	Q02931	896 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	TDA5	Q06417	326 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	TIF6	Q12522	245 aa	Known RBP	5.84	□□□□□ -1.47
CMR3	YPR013C	FLP1	P03870	423 aa		5.83	□□□□□ -1.48
CMR3	YPR013C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
CMR3	YPR013C	ALA1	P40825	983 aa	Known RBP	5.83	□□□□□ -1.48
CMR3	YPR013C	ATG36	P46983	293 aa		5.83	□□□□□ -1.48
CMR3	YPR013C	YJR008W	P47085	338 aa		5.83	□□□□□ -1.48
CMR3	YPR013C	UBX5	Q06682	500 aa		5.83	□□□□□ -1.48
CMR3	YPR013C	OPI10	Q08202	246 aa		5.83	□□□□□ -1.48
CMR3	YPR013C	RAD4	P14736	754 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	PRI2	P20457	528 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	YGR053C	P53234	283 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	HST3	P53687	447 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	YNL165W	P53891	406 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	YPL109C	Q02981	657 aa		5.82	□□□□□ -1.48
CMR3	YPR013C	UTP14	Q04500	899 aa	Known RBP	5.82	□□□□□ -1.48
CMR3	YPR013C	MLF3	P32047	452 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	MNN1	P39106	762 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	SPF1	P39986	1215 aa	Known RBP	5.81	□□□□□ -1.48
CMR3	YPR013C	NUP82	P40368	713 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	TIM54	P47045	478 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	MSB3	P48566	633 aa	Predicted RBP	5.81	□□□□□ -1.48
CMR3	YPR013C	YGL081W	P53156	320 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	YGR161W-C	Q3E744	92 aa		5.81	□□□□□ -1.48
CMR3	YPR013C	SSB1	P11484	613 aa	Known RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	MCM5	P29496	775 aa	Known RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	KAP122	P32767	1081 aa		5.8	□□□□□ -1.48
CMR3	YPR013C	ISW1	P38144	1129 aa		5.8	□□□□□ -1.48
CMR3	YPR013C	ECM2	P38241	364 aa	Known RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	NUG1	P40010	520 aa	Known RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	CHZ1	P40019	153 aa	Predicted RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	SSB2	P40150	613 aa	Known RBP	5.8	□□□□□ -1.48
CMR3	YPR013C	YTA6	P40328	754 aa		5.8	□□□□□ -1.48
CMR3	YPR013C	ADI1	Q03677	179 aa		5.8	□□□□□ -1.48
CMR3	YPR013C	DUT1	P33317	147 aa		5.79	□□□□□ -1.48
CMR3	YPR013C	ULP1	Q02724	621 aa		5.79	□□□□□ -1.48
CMR3	YPR013C	PPM2	Q08282	695 aa		5.79	□□□□□ -1.48
CMR3	YPR013C	RTT10	Q08924	1013 aa		5.79	□□□□□ -1.48
CMR3	YPR013C	PHO8	P11491	566 aa		5.78	□□□□□ -1.48
CMR3	YPR013C	UGA4	P32837	571 aa		5.78	□□□□□ -1.48
CMR3	YPR013C	GIP1	P38229	639 aa		5.78	□□□□□ -1.48
CMR3	YPR013C	TYW3	P53177	273 aa		5.78	□□□□□ -1.48
CMR3	YPR013C	TMA46	Q12000	345 aa	Known RBP	5.78	□□□□□ -1.48
CMR3	YPR013C	FAL1	Q12099	399 aa	Known RBP	5.78	□□□□□ -1.48
CMR3	YPR013C	GCR1	P07261	785 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	GRX4	P32642	244 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	AIM46	P38885	310 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	ACO2	P39533	789 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	PIC2	P40035	300 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	MSH4	P40965	878 aa	Predicted RBP	5.77	□□□□□ -1.49
CMR3	YPR013C	YJR142W	P47173	342 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	MON1	P53129	644 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	YOR296W	Q08748	1289 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	YLR125W	Q12138	136 aa		5.77	□□□□□ -1.49
CMR3	YPR013C	CCP1	P00431	361 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	RAD27	P26793	382 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	TIM23	P32897	222 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	YKL069W	P36088	180 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	BSD2	P38356	321 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	SSN3	P39073	555 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	RVS167	P39743	482 aa	Known RBP	5.76	□□□□□ -1.49
CMR3	YPR013C	KRI1	P42846	591 aa	Known RBP	5.76	□□□□□ -1.49
CMR3	YPR013C	JJJ2	P46997	583 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	NUT1	P53114	1132 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	CTR9	P89105	1077 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	FLC1	Q08967	793 aa		5.76	□□□□□ -1.49
CMR3	YPR013C	RPS31	P05759	152 aa	Known RBP	5.75	□□□□□ -1.49
CMR3	YPR013C	RPC31	P17890	251 aa		5.75	□□□□□ -1.49
CMR3	YPR013C	BAS1	P22035	811 aa		5.75	□□□□□ -1.49
CMR3	YPR013C	YHR020W	P38708	688 aa	Known RBP	5.75	□□□□□ -1.49
CMR3	YPR013C	RSP5	P39940	809 aa	Known RBP	5.75	□□□□□ -1.49
CMR3	YPR013C	PTK2	P47116	818 aa	Known RBP	5.75	□□□□□ -1.49
CMR3	YPR013C	MSN5	P52918	1224 aa		5.75	□□□□□ -1.49
CMR3	YPR013C	MSH6	Q03834	1242 aa		5.75	□□□□□ -1.49
CMR3	YPR013C	SPO75	Q07798	868 aa		5.75	□□□□□ -1.49
CMR3	YPR013C	THI4	P32318	326 aa		5.74	□□□□□ -1.49
CMR3	YPR013C	SQT1	P35184	431 aa		5.74	□□□□□ -1.49
CMR3	YPR013C	EMG1	Q06287	252 aa	Known RBP	5.74	□□□□□ -1.49
CMR3	YPR013C	OPT2	Q06593	877 aa		5.74	□□□□□ -1.49
CMR3	YPR013C	MRL1	Q06815	381 aa		5.74	□□□□□ -1.49
CMR3	YPR013C	OSH2	Q12451	1283 aa		5.74	□□□□□ -1.49
CMR3	YPR013C	COB	P00163	385 aa		5.73	□□□□□ -1.49
CMR3	YPR013C	SHM1	P37292	490 aa	Predicted RBP	5.73	□□□□□ -1.49
CMR3	YPR013C	GGA2	P38817	585 aa	Known RBP	5.73	□□□□□ -1.49
CMR3	YPR013C	XKS1	P42826	600 aa		5.73	□□□□□ -1.49
CMR3	YPR013C	YGR125W	P53273	1036 aa		5.73	□□□□□ -1.49
CMR3	YPR013C	KRE33	P53914	1056 aa	Known RBP	5.73	□□□□□ -1.49
CMR3	YPR013C	EEB1	Q02891	456 aa		5.73	□□□□□ -1.49
CMR3	YPR013C	PMT7	Q06644	662 aa		5.73	□□□□□ -1.49
CMR3	YPR013C	GAL11	P19659	1081 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	IRE1	P32361	1115 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
CMR3	YPR013C	AHP1	P38013	176 aa	Known RBP	5.72	□□□□□ -1.49
CMR3	YPR013C	YBR184W	P38299	523 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	UBP12	P39538	1254 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	RSM26	P47141	266 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	CAF120	P53836	1060 aa		5.72	□□□□□ -1.49
CMR3	YPR013C	HSP60	P19882	572 aa	Known RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms