RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	MSH3	P25336	1018 aa		5.53	□□□□□ -1.52
PXA1	YPL147W	CPS1	P27614	576 aa		5.53	□□□□□ -1.52
PXA1	YPL147W	GLO3	P38682	493 aa	Known RBP	5.53	□□□□□ -1.52
PXA1	YPL147W	CAJ1	P39101	391 aa		5.53	□□□□□ -1.52
PXA1	YPL147W	JJJ1	P53863	590 aa		5.53	□□□□□ -1.52
PXA1	YPL147W	NOB1	Q08444	459 aa	Known RBP	5.53	□□□□□ -1.52
PXA1	YPL147W	RKM4	Q12504	494 aa		5.53	□□□□□ -1.52
PXA1	YPL147W	MCM3	P24279	971 aa	Known RBP	5.52	□□□□□ -1.53
PXA1	YPL147W	MEF1	P25039	761 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	YEN1	P40028	759 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	YJL007C	P47080	104 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	UBP1	P25037	809 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	BUD31	P25337	157 aa	Predicted RBP	5.52	□□□□□ -1.53
PXA1	YPL147W	MTC2	P34246	357 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	TBS1	P38114	1094 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	CHZ1	P40019	153 aa	Predicted RBP	5.52	□□□□□ -1.53
PXA1	YPL147W	ACF4	P47129	309 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	ITC1	P53125	1264 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	SPO20	Q04359	397 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	EDE1	P34216	1381 aa		5.52	□□□□□ -1.53
PXA1	YPL147W	DPS1	P04802	557 aa	Known RBP	5.51	□□□□□ -1.53
PXA1	YPL147W	PRT1	P06103	763 aa	Known RBP	5.51	□□□□□ -1.53
PXA1	YPL147W	PBS2	P08018	668 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	HNM1	P19807	563 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	IPL1	P38991	367 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	BIM1	P40013	344 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	SNZ1	Q03148	297 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	YOR131C	Q12486	218 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	CLC1	P17891	233 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	PGS1	P25578	521 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	KRR1	P25586	316 aa	Predicted RBP	5.51	□□□□□ -1.53
PXA1	YPL147W	AAD3	P25612	363 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	MNN1	P39106	762 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	PXA1	P41909	870 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	YJR142W	P47173	342 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	YNL050C	P53952	270 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	ARR1	Q06596	294 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	SWA2	Q06677	668 aa		5.51	□□□□□ -1.53
PXA1	YPL147W	PHO87	P25360	923 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	ESL2	P36168	1195 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	OPY1	P38271	328 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
PXA1	YPL147W	IRR1	P40541	1150 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	SVL3	Q03088	825 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	ARV1	Q06541	321 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	MAK21	Q12176	1025 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	NYV1	Q12255	253 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	DBP10	Q12389	995 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	GFD2	P25370	566 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	YKR023W	P36119	530 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	POP2	P39008	433 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	ATF2	P53296	535 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	ATG38	Q05789	226 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	NDL1	Q06568	189 aa		5.5	□□□□□ -1.53
PXA1	YPL147W	VIP1	Q06685	1146 aa	Known RBP	5.5	□□□□□ -1.53
PXA1	YPL147W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
PXA1	YPL147W	PSE1	P32337	1089 aa	Known RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	HIR2	P32480	875 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	NPL4	P33755	580 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	APL2	P36000	726 aa	Predicted RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	UBP14	P38237	781 aa	Known RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	SET1	P38827	1080 aa	Known RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	VID27	P40157	782 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	VTC2	P43585	828 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	SPP382	Q06411	708 aa	Predicted RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	BUD14	P27637	709 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	YKL100C	P34248	587 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	CCL1	P37366	393 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	EFM2	P38347	419 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	GTT3	P39996	337 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	DAS1	P47005	663 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	SRB7	P47822	140 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	YGR016W	P53209	190 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	RSC1	P53236	928 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	APP1	P53933	587 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	ATG26	Q06321	1198 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	BRR1	Q99177	341 aa	Predicted RBP	5.49	□□□□□ -1.53
PXA1	YPL147W	YRF1-2	P40105	1681 aa		5.49	□□□□□ -1.53
PXA1	YPL147W	PXA2	P34230	853 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	ATG19	P35193	415 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	YER034W	P40022	185 aa	Known RBP	5.48	□□□□□ -1.53
PXA1	YPL147W	UTP18	P40362	594 aa	Predicted RBP	5.48	□□□□□ -1.53
PXA1	YPL147W	POL32	P47110	350 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	UTP14	Q04500	899 aa	Known RBP	5.48	□□□□□ -1.53
PXA1	YPL147W	PMT7	Q06644	662 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
PXA1	YPL147W	MSB4	Q12317	492 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	RTP1	Q12751	981 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	CAT8	P39113	1433 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	PDR11	P40550	1411 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	KAR3	P17119	729 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	PEP12	P32854	288 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	VAC8	P39968	578 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	MAM1	P40065	302 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	YGR021W	P53212	290 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	RAD33	Q04231	177 aa		5.48	□□□□□ -1.53
PXA1	YPL147W	MRD1	Q06106	887 aa	Known RBP	5.48	□□□□□ -1.53
PXA1	YPL147W	TSR2	Q06672	205 aa	Known RBP	5.48	□□□□□ -1.53
PXA1	YPL147W	PMS1	P14242	873 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	SMC3	P47037	1230 aa		5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms