RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W MSC7P38694 644 aa3.63□□□□□ -1.83
BRO1YPL084W FAA3P39002 694 aa3.63□□□□□ -1.83
BRO1YPL084W PPT1P53043 513 aa3.63□□□□□ -1.83
BRO1YPL084W YGR122WP53272 402 aa3.63□□□□□ -1.83
BRO1YPL084W HEH2Q03281 663 aa3.63□□□□□ -1.83
BRO1YPL084W CCP1P00431 361 aa3.63□□□□□ -1.83
BRO1YPL084W IDI1P15496 288 aa3.63□□□□□ -1.83
BRO1YPL084W GAR1P28007 205 aaKnown RBP3.63□□□□□ -1.83
BRO1YPL084W ACO2P39533 789 aa3.63□□□□□ -1.83
BRO1YPL084W YER156CP40093 338 aaKnown RBP3.63□□□□□ -1.83
BRO1YPL084W YJL181WP46987 611 aa3.63□□□□□ -1.83
BRO1YPL084W MON1P53129 644 aa3.63□□□□□ -1.83
BRO1YPL084W CYC8P14922 966 aa3.62□□□□□ -1.83
BRO1YPL084W PRP40P33203 583 aaKnown RBP3.62□□□□□ -1.83
BRO1YPL084W DUR3P33413 735 aa3.62□□□□□ -1.83
BRO1YPL084W NUT1P53114 1132 aa3.62□□□□□ -1.83
BRO1YPL084W HXK1P04806 485 aaKnown RBP3.62□□□□□ -1.83
BRO1YPL084W RAD2P07276 1031 aa3.62□□□□□ -1.83
BRO1YPL084W UGA4P32837 571 aa3.62□□□□□ -1.83
BRO1YPL084W CEM1P39525 442 aa3.62□□□□□ -1.83
BRO1YPL084W RSC2Q06488 889 aa3.62□□□□□ -1.83
BRO1YPL084W RVS167P39743 482 aaKnown RBP3.61□□□□□ -1.83
BRO1YPL084W SYT1Q06836 1226 aa3.61□□□□□ -1.83
BRO1YPL084W YDR461C-AQ2V2P7 80 aa3.61□□□□□ -1.83
BRO1YPL084W MRPS18P42847 217 aa3.61□□□□□ -1.83
BRO1YPL084W MRP10O75012 95 aa3.6□□□□□ -1.83
BRO1YPL084W KAR2P16474 682 aaKnown RBP3.6□□□□□ -1.83
BRO1YPL084W MCM5P29496 775 aaKnown RBP3.6□□□□□ -1.83
BRO1YPL084W INP51P40559 946 aaKnown RBP3.6□□□□□ -1.83
BRO1YPL084W ULP1Q02724 621 aa3.6□□□□□ -1.83
BRO1YPL084W RMD1Q03441 430 aa3.6□□□□□ -1.83
BRO1YPL084W MSH6Q03834 1242 aa3.6□□□□□ -1.83
BRO1YPL084W TY1A-DR2Q03964 440 aaKnown RBP3.6□□□□□ -1.83
BRO1YPL084W ESF1Q06344 628 aaKnown RBP3.6□□□□□ -1.83
BRO1YPL084W FUS1P11710 512 aa3.6□□□□□ -1.83
BRO1YPL084W PRK1P40494 810 aa3.6□□□□□ -1.83
BRO1YPL084W NPR1P22211 790 aa3.59□□□□□ -1.83
BRO1YPL084W LYS5P50113 272 aa3.59□□□□□ -1.83
BRO1YPL084W ALD3P54114 506 aa3.59□□□□□ -1.83
BRO1YPL084W MAG2Q06436 670 aaKnown RBP3.59□□□□□ -1.83
BRO1YPL084W PMT7Q06644 662 aa3.59□□□□□ -1.83
BRO1YPL084W PRE9P23638 258 aaKnown RBP3.59□□□□□ -1.84
BRO1YPL084W NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.84
BRO1YPL084W MAD1P40957 749 aa3.59□□□□□ -1.84
BRO1YPL084W BIO5P53744 561 aaKnown RBP3.59□□□□□ -1.84
BRO1YPL084W MCD1Q12158 566 aa3.59□□□□□ -1.84
BRO1YPL084W CMR1Q12510 522 aaKnown RBP3.59□□□□□ -1.84
BRO1YPL084W PET112P33893 541 aa3.58□□□□□ -1.84
BRO1YPL084W RIM11P38615 370 aa3.58□□□□□ -1.84
BRO1YPL084W YJR124CP47159 448 aa3.58□□□□□ -1.84
BRO1YPL084W YAF9P53930 226 aa3.58□□□□□ -1.84
BRO1YPL084W ADI1Q03677 179 aa3.58□□□□□ -1.84
BRO1YPL084W GLO4Q12320 285 aa3.58□□□□□ -1.84
BRO1YPL084W GBP2P25555 427 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
BRO1YPL084W TFA2P36145 328 aa3.58□□□□□ -1.84
BRO1YPL084W SAP155P43612 1002 aa3.58□□□□□ -1.84
BRO1YPL084W YNR065CP53751 1116 aa3.58□□□□□ -1.84
BRO1YPL084W YPL109CQ02981 657 aa3.58□□□□□ -1.84
BRO1YPL084W YDL176WQ12027 708 aa3.58□□□□□ -1.84
BRO1YPL084W RSM26P47141 266 aa3.57□□□□□ -1.84
BRO1YPL084W SQT1P35184 431 aa3.56□□□□□ -1.84
BRO1YPL084W PIC2P40035 300 aa3.56□□□□□ -1.84
BRO1YPL084W PEX13P80667 386 aa3.56□□□□□ -1.84
BRO1YPL084W CLN2P20438 545 aa3.56□□□□□ -1.84
BRO1YPL084W PRP5P21372 849 aaPredicted RBP3.56□□□□□ -1.84
BRO1YPL084W VAC8P39968 578 aa3.56□□□□□ -1.84
BRO1YPL084W LSB6P42951 607 aa3.56□□□□□ -1.84
BRO1YPL084W ALD6P54115 500 aaKnown RBP3.56□□□□□ -1.84
BRO1YPL084W VPS16Q03308 798 aa3.56□□□□□ -1.84
BRO1YPL084W PIN2Q12057 282 aa3.56□□□□□ -1.84
BRO1YPL084W HVG1P0CE11 249 aa3.55□□□□□ -1.84
BRO1YPL084W AMN1P38285 549 aaPredicted RBP3.55□□□□□ -1.84
BRO1YPL084W SOG2Q08817 791 aa3.55□□□□□ -1.84
BRO1YPL084W PDC5P16467 563 aaKnown RBP3.55□□□□□ -1.84
BRO1YPL084W MNR2P35724 969 aa3.55□□□□□ -1.84
BRO1YPL084W SOK2P53438 785 aaPredicted RBP3.55□□□□□ -1.84
BRO1YPL084W CWC24P53769 259 aa3.55□□□□□ -1.84
BRO1YPL084W GPM1P00950 247 aaKnown RBP3.54□□□□□ -1.84
BRO1YPL084W MSH3P25336 1018 aa3.54□□□□□ -1.84
BRO1YPL084W PEX28P38848 579 aa3.54□□□□□ -1.84
BRO1YPL084W NEO1P40527 1151 aa3.54□□□□□ -1.84
BRO1YPL084W FET4P40988 552 aa3.54□□□□□ -1.84
BRO1YPL084W HPF1Q05164 967 aa3.54□□□□□ -1.84
BRO1YPL084W GCR1P07261 785 aa3.54□□□□□ -1.84
BRO1YPL084W KNS1P32350 737 aaPredicted RBP3.54□□□□□ -1.84
BRO1YPL084W GUP1P53154 560 aa3.54□□□□□ -1.84
BRO1YPL084W NOG1Q02892 647 aaKnown RBP3.54□□□□□ -1.84
BRO1YPL084W HTS1P07263 546 aaKnown RBP3.53□□□□□ -1.84
BRO1YPL084W SHU2P38957 223 aa3.53□□□□□ -1.84
BRO1YPL084W XKS1P42826 600 aa3.53□□□□□ -1.84
BRO1YPL084W NAR1P23503 491 aaKnown RBP3.53□□□□□ -1.84
BRO1YPL084W YKL077WP36081 392 aa3.53□□□□□ -1.84
BRO1YPL084W GIP2P40036 548 aa3.53□□□□□ -1.84
BRO1YPL084W YGL140CP53120 1219 aa3.53□□□□□ -1.84
BRO1YPL084W HAS1Q03532 505 aaKnown RBP3.53□□□□□ -1.84
BRO1YPL084W MRL1Q06815 381 aa3.53□□□□□ -1.84
BRO1YPL084W CDC34P14682 295 aa3.52□□□□□ -1.85
BRO1YPL084W PGM2P37012 569 aaKnown RBP3.52□□□□□ -1.85
BRO1YPL084W JJJ3P47138 172 aa3.52□□□□□ -1.85
BRO1YPL084W GDE1Q02979 1223 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms