RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W SAC7P17121 654 aa5.13□□□□□ -1.59
UBP16YPL072W CDC3P32457 520 aaKnown RBP5.13□□□□□ -1.59
UBP16YPL072W GEF1P37020 779 aa5.13□□□□□ -1.59
UBP16YPL072W LEM3P42838 414 aa5.13□□□□□ -1.59
UBP16YPL072W GAS5Q08193 484 aa5.13□□□□□ -1.59
UBP16YPL072W SBP1P10080 294 aaKnown RBP5.13□□□□□ -1.59
UBP16YPL072W TFA2P36145 328 aa5.13□□□□□ -1.59
UBP16YPL072W ACF4P47129 309 aa5.13□□□□□ -1.59
UBP16YPL072W UFD2P54860 961 aa5.13□□□□□ -1.59
UBP16YPL072W ARI1P53111 347 aaKnown RBP5.12□□□□□ -1.59
UBP16YPL072W DSE4P53753 1117 aa5.12□□□□□ -1.59
UBP16YPL072W TRL1P09880 827 aaKnown RBP5.1□□□□□ -1.59
UBP16YPL072W PYC2P32327 1180 aaKnown RBP5.1□□□□□ -1.59
UBP16YPL072W PGM1P33401 570 aaKnown RBP5.1□□□□□ -1.59
UBP16YPL072W PAN5P38787 379 aa5.1□□□□□ -1.59
UBP16YPL072W RSC4Q02206 625 aa5.1□□□□□ -1.59
UBP16YPL072W TY1A-NL1Q12391 440 aaKnown RBP5.1□□□□□ -1.59
UBP16YPL072W HVG1P0CE11 249 aa5.09□□□□□ -1.59
UBP16YPL072W RSC6P25632 483 aa5.09□□□□□ -1.59
UBP16YPL072W YJR124CP47159 448 aa5.08□□□□□ -1.6
UBP16YPL072W YNR065CP53751 1116 aa5.08□□□□□ -1.6
UBP16YPL072W CTR9P89105 1077 aa5.08□□□□□ -1.6
UBP16YPL072W TRS120Q04183 1289 aa5.08□□□□□ -1.6
UBP16YPL072W GLO4Q12320 285 aa5.08□□□□□ -1.6
UBP16YPL072W POL5P39985 1022 aaKnown RBP5.07□□□□□ -1.6
UBP16YPL072W SPO71Q03868 1245 aa5.07□□□□□ -1.6
UBP16YPL072W ERP5P38819 212 aa5.07□□□□□ -1.6
UBP16YPL072W YNL011CP53980 444 aa5.07□□□□□ -1.6
UBP16YPL072W MNL2Q12205 849 aa5.07□□□□□ -1.6
UBP16YPL072W NEO1P40527 1151 aa5.06□□□□□ -1.6
UBP16YPL072W MDJ2P42834 146 aa5.06□□□□□ -1.6
UBP16YPL072W HAS1Q03532 505 aaKnown RBP5.06□□□□□ -1.6
UBP16YPL072W HAT1Q12341 374 aa5.06□□□□□ -1.6
UBP16YPL072W YBL113CQ7M4S9 792 aa5.06□□□□□ -1.6
UBP16YPL072W GLT1Q12680 2145 aaKnown RBP5.05□□□□□ -1.6
UBP16YPL072W MAE1P36013 669 aaKnown RBP5.05□□□□□ -1.6
UBP16YPL072W GRS1P38088 690 aaKnown RBP5.05□□□□□ -1.6
UBP16YPL072W FET4P40988 552 aa5.05□□□□□ -1.6
UBP16YPL072W COBP00163 385 aa5.04□□□□□ -1.6
UBP16YPL072W COQ2P32378 372 aa5.04□□□□□ -1.6
UBP16YPL072W CDC55Q00362 526 aa5.04□□□□□ -1.6
UBP16YPL072W ELG1Q12050 791 aa5.04□□□□□ -1.6
UBP16YPL072W REC8Q12188 680 aa5.04□□□□□ -1.6
UBP16YPL072W NRD1P53617 575 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
UBP16YPL072W BSC2Q05611 235 aa5.03□□□□□ -1.6
UBP16YPL072W ECM2P38241 364 aaKnown RBP5.02□□□□□ -1.61
UBP16YPL072W RIM11P38615 370 aa5.02□□□□□ -1.61
UBP16YPL072W NCE103P53615 221 aa5.02□□□□□ -1.61
UBP16YPL072W PRP5P21372 849 aaPredicted RBP5.02□□□□□ -1.61
UBP16YPL072W KAE1P36132 386 aa5.02□□□□□ -1.61
UBP16YPL072W SAF1P38352 637 aa5.02□□□□□ -1.61
UBP16YPL072W MSH6Q03834 1242 aa5.02□□□□□ -1.61
UBP16YPL072W NUT2Q06213 157 aa5.02□□□□□ -1.61
UBP16YPL072W YLR122CQ12312 125 aa5.02□□□□□ -1.61
UBP16YPL072W FRT1Q99332 602 aa5.02□□□□□ -1.61
UBP16YPL072W ERS1P17261 260 aa5.01□□□□□ -1.61
UBP16YPL072W NPR1P22211 790 aa5.01□□□□□ -1.61
UBP16YPL072W DUR3P33413 735 aa5.01□□□□□ -1.61
UBP16YPL072W FAR11P53917 953 aa5.01□□□□□ -1.61
UBP16YPL072W ALO1P54783 526 aaKnown RBP5.01□□□□□ -1.61
UBP16YPL072W TAF7Q05021 590 aa5.01□□□□□ -1.61
UBP16YPL072W CMR1Q12510 522 aaKnown RBP5.01□□□□□ -1.61
UBP16YPL072W FLP1P03870 423 aa5□□□□□ -1.61
UBP16YPL072W YHL008CP38750 627 aa5□□□□□ -1.61
UBP16YPL072W SAP155P43612 1002 aa5□□□□□ -1.61
UBP16YPL072W PUF3Q07807 879 aaKnown RBP RIP-Chip data5□□□□□ -1.61 RIP-Chip
UBP16YPL072W GPI13Q07830 1017 aa5□□□□□ -1.61
UBP16YPL072W CHS2P14180 963 aa4.99□□□□□ -1.61
UBP16YPL072W NAM7P30771 971 aaKnown RBP4.99□□□□□ -1.61
UBP16YPL072W AKR1P39010 764 aa4.99□□□□□ -1.61
UBP16YPL072W INP52P50942 1183 aa4.99□□□□□ -1.61
UBP16YPL072W KIP3P53086 805 aaKnown RBP4.99□□□□□ -1.61
UBP16YPL072W MAC1P35192 417 aa4.98□□□□□ -1.61
UBP16YPL072W OMA1P36163 345 aa4.98□□□□□ -1.61
UBP16YPL072W MED7Q08278 222 aa4.98□□□□□ -1.61
UBP16YPL072W YIG1Q08956 461 aa4.98□□□□□ -1.61
UBP16YPL072W HTS1P07263 546 aaKnown RBP4.97□□□□□ -1.61
UBP16YPL072W SSF1P38789 453 aaPredicted RBP4.97□□□□□ -1.61
UBP16YPL072W GCV1P48015 400 aa4.97□□□□□ -1.61
UBP16YPL072W NUT1P53114 1132 aa4.97□□□□□ -1.61
UBP16YPL072W INP54Q08227 384 aaKnown RBP4.97□□□□□ -1.61
UBP16YPL072W YLL054CQ12244 843 aa4.97□□□□□ -1.61
UBP16YPL072W TRP3P00937 484 aa4.97□□□□□ -1.61
UBP16YPL072W YKR073CP36153 106 aa4.97□□□□□ -1.61
UBP16YPL072W SAM37P50110 327 aa4.97□□□□□ -1.61
UBP16YPL072W YMR074CQ04773 145 aa4.97□□□□□ -1.61
UBP16YPL072W PMT7Q06644 662 aa4.97□□□□□ -1.61
UBP16YPL072W NOC3Q07896 663 aaPredicted RBP4.97□□□□□ -1.61
UBP16YPL072W YOR223WQ12015 292 aa4.97□□□□□ -1.61
UBP16YPL072W YHL050CP38721 697 aa4.96□□□□□ -1.62
UBP16YPL072W YHR219WP38900 624 aa4.96□□□□□ -1.62
UBP16YPL072W YGR130CP53278 816 aa4.96□□□□□ -1.62
UBP16YPL072W MSB1P21339 1137 aaKnown RBP4.95□□□□□ -1.62
UBP16YPL072W RVS167P39743 482 aaKnown RBP4.95□□□□□ -1.62
UBP16YPL072W SPO74P45819 413 aa4.95□□□□□ -1.62
UBP16YPL072W YAF9P53930 226 aa4.95□□□□□ -1.62
UBP16YPL072W GIC2Q06648 383 aa4.95□□□□□ -1.62
UBP16YPL072W CIC1P38779 376 aaKnown RBP4.94□□□□□ -1.62
UBP16YPL072W STM1P39015 273 aaKnown RBP4.94□□□□□ -1.62
UBP16YPL072W UTP22P53254 1237 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms