RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	TRS33	Q99394	268 aa		4.32	□□□□□ -1.72
LYS9	YNR050C	MSN1	P22148	382 aa		4.31	□□□□□ -1.72
LYS9	YNR050C	POL12	P38121	705 aa	Predicted RBP	4.31	□□□□□ -1.72
LYS9	YNR050C	LEM3	P42838	414 aa		4.31	□□□□□ -1.72
LYS9	YNR050C	ECL1	P48235	211 aa		4.31	□□□□□ -1.72
LYS9	YNR050C	FOX2	Q02207	900 aa	Known RBP	4.31	□□□□□ -1.72
LYS9	YNR050C	EMG1	Q06287	252 aa	Known RBP	4.31	□□□□□ -1.72
LYS9	YNR050C	MAE1	P36013	669 aa	Known RBP	4.3	□□□□□ -1.72
LYS9	YNR050C	TAF1	P46677	1066 aa		4.3	□□□□□ -1.72
LYS9	YNR050C	ESC8	Q08119	714 aa		4.3	□□□□□ -1.72
LYS9	YNR050C	DFG16	Q99234	619 aa		4.3	□□□□□ -1.72
LYS9	YNR050C	YKL222C	P35995	705 aa		4.29	□□□□□ -1.72
LYS9	YNR050C	SIS2	P36024	562 aa		4.29	□□□□□ -1.72
LYS9	YNR050C	ELG1	Q12050	791 aa		4.29	□□□□□ -1.72
LYS9	YNR050C	ERS1	P17261	260 aa		4.28	□□□□□ -1.72
LYS9	YNR050C	CDA2	Q06703	312 aa		4.28	□□□□□ -1.72
LYS9	YNR050C	TGL4	P36165	910 aa		4.27	□□□□□ -1.73
LYS9	YNR050C	BOI1	P38041	980 aa	Known RBP	4.27	□□□□□ -1.73
LYS9	YNR050C	SPO71	Q03868	1245 aa		4.27	□□□□□ -1.73
LYS9	YNR050C	GIC2	Q06648	383 aa		4.27	□□□□□ -1.73
LYS9	YNR050C	ISC10	P32645	267 aa		4.26	□□□□□ -1.73
LYS9	YNR050C	TSA1	P34760	196 aa	Known RBP	4.26	□□□□□ -1.73
LYS9	YNR050C	YHL008C	P38750	627 aa		4.26	□□□□□ -1.73
LYS9	YNR050C	KIP3	P53086	805 aa	Known RBP	4.26	□□□□□ -1.73
LYS9	YNR050C	HVG1	P0CE11	249 aa		4.25	□□□□□ -1.73
LYS9	YNR050C	FUS1	P11710	512 aa		4.25	□□□□□ -1.73
LYS9	YNR050C	GAS1	P22146	559 aa	Known RBP	4.25	□□□□□ -1.73
LYS9	YNR050C	THI80	P35202	319 aa		4.25	□□□□□ -1.73
LYS9	YNR050C	YNR065C	P53751	1116 aa		4.24	□□□□□ -1.73
LYS9	YNR050C	ECM23	Q02710	187 aa		4.24	□□□□□ -1.73
LYS9	YNR050C	KTR2	P33550	425 aa		4.23	□□□□□ -1.73
LYS9	YNR050C	GIP4	P39732	760 aa		4.23	□□□□□ -1.73
LYS9	YNR050C	ALD4	P46367	519 aa	Known RBP	4.23	□□□□□ -1.73
LYS9	YNR050C	PRP43	P53131	767 aa	Known RBP	4.23	□□□□□ -1.73
LYS9	YNR050C	HAS1	Q03532	505 aa	Known RBP	4.23	□□□□□ -1.73
LYS9	YNR050C	WHI3	P34761	661 aa	Known RBP	4.22	□□□□□ -1.73
LYS9	YNR050C	AIM46	P38885	310 aa		4.22	□□□□□ -1.73
LYS9	YNR050C	RGD2	P43556	714 aa		4.22	□□□□□ -1.73
LYS9	YNR050C	YJR124C	P47159	448 aa		4.22	□□□□□ -1.73
LYS9	YNR050C	GIS1	Q03833	894 aa		4.22	□□□□□ -1.73
LYS9	YNR050C	NEO1	P40527	1151 aa		4.21	□□□□□ -1.73
LYS9	YNR050C	GLO4	Q12320	285 aa		4.21	□□□□□ -1.73
LYS9	YNR050C	HSP78	P33416	811 aa		4.21	□□□□□ -1.74
LYS9	YNR050C	TTI1	P36097	1038 aa		4.21	□□□□□ -1.74
LYS9	YNR050C	UBX7	P38349	436 aa		4.21	□□□□□ -1.74
LYS9	YNR050C	HXT8	P40886	569 aa		4.21	□□□□□ -1.74
LYS9	YNR050C	MMM1	P41800	426 aa		4.21	□□□□□ -1.74
LYS9	YNR050C	CIT3	P43635	486 aa		4.2	□□□□□ -1.74
LYS9	YNR050C	OYE3	P41816	400 aa	Predicted RBP	4.19	□□□□□ -1.74
LYS9	YNR050C	GPT2	P36148	743 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	FLR1	P38124	548 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	YBR287W	P38355	427 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	FIR1	P40020	876 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	NTA1	P40354	457 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	FAR11	P53917	953 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	RCM1	P53972	490 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	HDA2	Q06629	674 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	YOR223W	Q12015	292 aa		4.18	□□□□□ -1.74
LYS9	YNR050C	ORC3	P54790	616 aa		4.17	□□□□□ -1.74
LYS9	YNR050C	PRP6	P19735	899 aa	Predicted RBP	4.16	□□□□□ -1.74
LYS9	YNR050C	HGH1	P48362	394 aa	Known RBP	4.16	□□□□□ -1.74
LYS9	YNR050C	PUN1	Q06991	263 aa		4.16	□□□□□ -1.74
LYS9	YNR050C	APC11	Q12157	165 aa		4.16	□□□□□ -1.74
LYS9	YNR050C	FET4	P40988	552 aa		4.15	□□□□□ -1.75
LYS9	YNR050C	PUF6	Q04373	656 aa	Known RBP	4.15	□□□□□ -1.75
LYS9	YNR050C	YOR059C	Q08448	450 aa	Known RBP	4.15	□□□□□ -1.75
LYS9	YNR050C	NSI1	Q12457	570 aa		4.15	□□□□□ -1.75
LYS9	YNR050C	TIF6	Q12522	245 aa	Known RBP	4.15	□□□□□ -1.75
LYS9	YNR050C	SRS2	P12954	1174 aa		4.14	□□□□□ -1.75
LYS9	YNR050C	PYC2	P32327	1180 aa	Known RBP	4.14	□□□□□ -1.75
LYS9	YNR050C	PUP1	P25043	261 aa		4.13	□□□□□ -1.75
LYS9	YNR050C	DOT1	Q04089	582 aa	Known RBP	4.13	□□□□□ -1.75
LYS9	YNR050C	YMR074C	Q04773	145 aa		4.13	□□□□□ -1.75
LYS9	YNR050C	LPX1	Q12405	387 aa	Known RBP	4.13	□□□□□ -1.75
LYS9	YNR050C	CWC15	Q03772	175 aa	Known RBP	4.12	□□□□□ -1.75
LYS9	YNR050C	ADP1	P25371	1049 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	IRS4	P36115	615 aa	Known RBP	4.11	□□□□□ -1.75
LYS9	YNR050C	RAD55	P38953	406 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	PEX7	P39108	375 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	PSY2	P40164	858 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	SUT1	P53032	299 aa	Known RBP	4.11	□□□□□ -1.75
LYS9	YNR050C	EAR1	Q03212	550 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	SSY1	Q03770	852 aa		4.11	□□□□□ -1.75
LYS9	YNR050C	RPS4A	P0CX35	261 aa	Known RBP	4.1	□□□□□ -1.75
LYS9	YNR050C	RPS4B	P0CX36	261 aa	Known RBP	4.1	□□□□□ -1.75
LYS9	YNR050C	RPB10	P22139	70 aa		4.1	□□□□□ -1.75
LYS9	YNR050C	GCV1	P48015	400 aa		4.1	□□□□□ -1.75
LYS9	YNR050C	CTR9	P89105	1077 aa		4.1	□□□□□ -1.75
LYS9	YNR050C	AIM3	P38266	947 aa	Known RBP	4.09	□□□□□ -1.75
LYS9	YNR050C	ALT1	P52893	592 aa		4.09	□□□□□ -1.75
LYS9	YNR050C	MSH6	Q03834	1242 aa		4.08	□□□□□ -1.76
LYS9	YNR050C	TRE1	Q08919	783 aa		4.08	□□□□□ -1.76
LYS9	YNR050C	YIG1	Q08956	461 aa		4.08	□□□□□ -1.76
LYS9	YNR050C	YDL177C	Q12257	170 aa		4.08	□□□□□ -1.76
LYS9	YNR050C	YVC1	Q12324	675 aa		4.08	□□□□□ -1.76
LYS9	YNR050C	CPS1	P27614	576 aa		4.07	□□□□□ -1.76
LYS9	YNR050C	MSH4	P40965	878 aa	Predicted RBP	4.07	□□□□□ -1.76
LYS9	YNR050C	YLL054C	Q12244	843 aa		4.07	□□□□□ -1.76
LYS9	YNR050C	COB	P00163	385 aa		4.06	□□□□□ -1.76
LYS9	YNR050C	SMC1	P32908	1225 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms