RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W VPS4P52917 437 aa6.93□□□□□ -1.3
LST8YNL006W TOS4Q06266 489 aa6.93□□□□□ -1.3
LST8YNL006W NOP8Q08287 484 aaPredicted RBP6.93□□□□□ -1.3
LST8YNL006W PSE1P32337 1089 aaKnown RBP6.92□□□□□ -1.3
LST8YNL006W TRM44Q02648 567 aaKnown RBP6.92□□□□□ -1.3
LST8YNL006W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
LST8YNL006W YPR015CQ12531 247 aa6.92□□□□□ -1.3
LST8YNL006W RPS19AP07280 144 aaKnown RBP6.91□□□□□ -1.3
LST8YNL006W RPS19BP07281 144 aaPredicted RBP6.91□□□□□ -1.3
LST8YNL006W RTG2P32608 588 aaKnown RBP6.91□□□□□ -1.3
LST8YNL006W AFG2P32794 780 aa6.91□□□□□ -1.3
LST8YNL006W PEX21P50091 288 aa6.91□□□□□ -1.3
LST8YNL006W IRC4Q03036 179 aa6.91□□□□□ -1.3
LST8YNL006W SRC1Q03707 834 aa6.91□□□□□ -1.3
LST8YNL006W RAM1P22007 431 aa6.9□□□□□ -1.3
LST8YNL006W MTC5Q03897 1148 aa6.9□□□□□ -1.3
LST8YNL006W MSM1P22438 575 aa6.89□□□□□ -1.31
LST8YNL006W LCB1P25045 558 aaKnown RBP6.89□□□□□ -1.31
LST8YNL006W SPO1P53541 631 aa6.89□□□□□ -1.31
LST8YNL006W TFB3Q03290 321 aa6.89□□□□□ -1.31
LST8YNL006W CDC73Q06697 393 aa6.89□□□□□ -1.31
LST8YNL006W ADR1P07248 1323 aa6.88□□□□□ -1.31
LST8YNL006W RPT3P33298 428 aaKnown RBP6.88□□□□□ -1.31
LST8YNL006W ORC6P38826 435 aa6.88□□□□□ -1.31
LST8YNL006W TIM50Q02776 476 aa6.88□□□□□ -1.31
LST8YNL006W ISU2Q12056 156 aa6.88□□□□□ -1.31
LST8YNL006W RRG1Q12167 365 aaPredicted RBP6.88□□□□□ -1.31
LST8YNL006W POM152P39685 1337 aa6.87□□□□□ -1.31
LST8YNL006W RPS9BP05755 195 aaKnown RBP6.87□□□□□ -1.31
LST8YNL006W HPR1P17629 752 aaKnown RBP6.87□□□□□ -1.31
LST8YNL006W YNG2P38806 282 aaKnown RBP6.87□□□□□ -1.31
LST8YNL006W SNU66Q12420 587 aaPredicted RBP6.87□□□□□ -1.31
LST8YNL006W FLO1P32768 1537 aa6.86□□□□□ -1.31
LST8YNL006W RPS7AP26786 190 aaKnown RBP6.86□□□□□ -1.31
LST8YNL006W UBX2Q04228 584 aa6.86□□□□□ -1.31
LST8YNL006W ARG82P07250 355 aa6.85□□□□□ -1.31
LST8YNL006W SEC18P18759 758 aaKnown RBP6.85□□□□□ -1.31
LST8YNL006W YIR042CP40586 236 aa6.85□□□□□ -1.31
LST8YNL006W EMP47P43555 445 aa6.85□□□□□ -1.31
LST8YNL006W CSN12P47130 423 aa6.85□□□□□ -1.31
LST8YNL006W YGR117CP53270 476 aa6.85□□□□□ -1.31
LST8YNL006W YNL193WP53870 558 aa6.85□□□□□ -1.31
LST8YNL006W RPN7Q06103 429 aaKnown RBP6.85□□□□□ -1.31
LST8YNL006W RAD2P07276 1031 aa6.84□□□□□ -1.31
LST8YNL006W GCD7P32502 381 aaPredicted RBP6.84□□□□□ -1.31
LST8YNL006W KTR3P38130 404 aaPredicted RBP6.84□□□□□ -1.31
LST8YNL006W GLO3P38682 493 aaKnown RBP6.84□□□□□ -1.31
LST8YNL006W UTP7P40055 554 aaKnown RBP6.84□□□□□ -1.31
LST8YNL006W YIL089WP40500 205 aa6.84□□□□□ -1.31
LST8YNL006W POL32P47110 350 aa6.84□□□□□ -1.31
LST8YNL006W YRB30P53107 440 aaPredicted RBP6.84□□□□□ -1.31
LST8YNL006W PRP42Q03776 544 aaKnown RBP6.84□□□□□ -1.31
LST8YNL006W PUF6Q04373 656 aaKnown RBP6.84□□□□□ -1.31
LST8YNL006W PKC1P24583 1151 aa6.83□□□□□ -1.32
LST8YNL006W BRL1P38770 471 aa6.83□□□□□ -1.32
LST8YNL006W SEN54Q02825 467 aaPredicted RBP6.83□□□□□ -1.32
LST8YNL006W WRS1Q12109 432 aaKnown RBP6.83□□□□□ -1.32
LST8YNL006W SUP35P05453 685 aaKnown RBP6.82□□□□□ -1.32
LST8YNL006W CBP1P07252 654 aa6.82□□□□□ -1.32
LST8YNL006W RGR1P19263 1082 aa6.82□□□□□ -1.32
LST8YNL006W ETP1P38748 585 aaKnown RBP6.82□□□□□ -1.32
LST8YNL006W PNT1P38969 423 aa6.82□□□□□ -1.32
LST8YNL006W HAL5P38970 855 aaKnown RBP6.82□□□□□ -1.32
LST8YNL006W JJJ2P46997 583 aa6.82□□□□□ -1.32
LST8YNL006W MTC3P53077 123 aa6.82□□□□□ -1.32
LST8YNL006W INM2Q05533 292 aa6.82□□□□□ -1.32
LST8YNL006W RAS1P01119 309 aa6.81□□□□□ -1.32
LST8YNL006W PDR1P12383 1068 aa6.81□□□□□ -1.32
LST8YNL006W PEA2P40091 420 aa6.81□□□□□ -1.32
LST8YNL006W NSG2P53898 299 aa6.81□□□□□ -1.32
LST8YNL006W CRF1Q04930 467 aa6.81□□□□□ -1.32
LST8YNL006W SNF3P10870 884 aa6.8□□□□□ -1.32
LST8YNL006W KTR1P27810 393 aaKnown RBP6.8□□□□□ -1.32
LST8YNL006W PTK1P36002 662 aaPredicted RBP6.8□□□□□ -1.32
LST8YNL006W YFH7P43591 353 aa6.8□□□□□ -1.32
LST8YNL006W RRI2Q12348 645 aa6.8□□□□□ -1.32
LST8YNL006W SSF1P38789 453 aaPredicted RBP6.79□□□□□ -1.32
LST8YNL006W NMD2P38798 1089 aaKnown RBP6.79□□□□□ -1.32
LST8YNL006W NUG1P40010 520 aaKnown RBP6.79□□□□□ -1.32
LST8YNL006W MVP1P40959 511 aaKnown RBP6.79□□□□□ -1.32
LST8YNL006W BDP1P46678 594 aa6.79□□□□□ -1.32
LST8YNL006W CWC15Q03772 175 aaKnown RBP6.78□□□□□ -1.32
LST8YNL006W MDL2P33311 773 aa6.77□□□□□ -1.33
LST8YNL006W PUS6P53294 404 aa6.77□□□□□ -1.33
LST8YNL006W ACK1Q07622 623 aaPredicted RBP6.77□□□□□ -1.33
LST8YNL006W TYW1Q08960 810 aaKnown RBP6.77□□□□□ -1.33
LST8YNL006W NOT3P06102 836 aaKnown RBP6.76□□□□□ -1.33
LST8YNL006W SDH2P21801 266 aa6.76□□□□□ -1.33
LST8YNL006W CLB5P30283 435 aa6.76□□□□□ -1.33
LST8YNL006W GRX7P38068 203 aa6.76□□□□□ -1.33
LST8YNL006W YGL242CP53066 181 aa6.76□□□□□ -1.33
LST8YNL006W PIB2P53191 635 aa6.76□□□□□ -1.33
LST8YNL006W DUS1P53759 423 aaKnown RBP6.76□□□□□ -1.33
LST8YNL006W ALO1P54783 526 aaKnown RBP6.76□□□□□ -1.33
LST8YNL006W RMD1Q03441 430 aa6.76□□□□□ -1.33
LST8YNL006W CSR2Q12734 1121 aa6.76□□□□□ -1.33
LST8YNL006W NCB2Q92317 146 aa6.76□□□□□ -1.33
LST8YNL006W PDR18P53756 1333 aa6.76□□□□□ -1.33
LST8YNL006W KEL1P38853 1164 aaKnown RBP6.75□□□□□ -1.33
LST8YNL006W BIM1P40013 344 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms