RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	RGD2	P43556	714 aa		5.02	□□□□□ -1.61
SEC59	YMR013C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	RIP-Chip
SEC59	YMR013C	BDF2	Q07442	638 aa		5.02	□□□□□ -1.61
SEC59	YMR013C	TIF6	Q12522	245 aa	Known RBP	5.02	□□□□□ -1.61
SEC59	YMR013C	MSN1	P22148	382 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	MLF3	P32047	452 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	FIR1	P40020	876 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	NTA1	P40354	457 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	MRPS18	P42847	217 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	GDE1	Q02979	1223 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	UTP4	Q06679	776 aa	Known RBP	5.01	□□□□□ -1.61
SEC59	YMR013C	YOR131C	Q12486	218 aa		5.01	□□□□□ -1.61
SEC59	YMR013C	CDC19	P00549	500 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	PRE9	P23638	258 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	PRP40	P33203	583 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	IRS4	P36115	615 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	PSY2	P40164	858 aa		5	□□□□□ -1.61
SEC59	YMR013C	ALA1	P40825	983 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	BUD6	P41697	788 aa		5	□□□□□ -1.61
SEC59	YMR013C	FAA4	P47912	694 aa	Known RBP	5	□□□□□ -1.61
SEC59	YMR013C	MCD1	Q12158	566 aa		5	□□□□□ -1.61
SEC59	YMR013C	CCP1	P00431	361 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	PRI2	P20457	528 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	GRX1	P25373	110 aa	Known RBP	4.99	□□□□□ -1.61
SEC59	YMR013C	YCS4	Q06156	1176 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	CDC34	P14682	295 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	TAT2	P38967	592 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	HUL5	P53119	910 aa		4.99	□□□□□ -1.61
SEC59	YMR013C	NAM8	Q00539	523 aa	Known RBP	4.99	□□□□□ -1.61
SEC59	YMR013C	FLP1	P03870	423 aa		4.98	□□□□□ -1.61
SEC59	YMR013C	MCM5	P29496	775 aa	Known RBP	4.98	□□□□□ -1.61
SEC59	YMR013C	UGA4	P32837	571 aa		4.98	□□□□□ -1.61
SEC59	YMR013C	BSD2	P38356	321 aa		4.98	□□□□□ -1.61
SEC59	YMR013C	VTC4	P47075	721 aa		4.98	□□□□□ -1.61
SEC59	YMR013C	YPL109C	Q02981	657 aa		4.98	□□□□□ -1.61
SEC59	YMR013C	DAL1	P32375	460 aa		4.97	□□□□□ -1.61
SEC59	YMR013C	TDA5	Q06417	326 aa	Known RBP	4.97	□□□□□ -1.61
SEC59	YMR013C	RAD4	P14736	754 aa		4.96	□□□□□ -1.62
SEC59	YMR013C	KAR2	P16474	682 aa	Known RBP	4.96	□□□□□ -1.62
SEC59	YMR013C	TSR4	P25040	408 aa		4.96	□□□□□ -1.62
SEC59	YMR013C	DUT1	P33317	147 aa		4.96	□□□□□ -1.62
SEC59	YMR013C	MON1	P53129	644 aa		4.96	□□□□□ -1.62
SEC59	YMR013C	NAN1	Q02931	896 aa	Known RBP	4.96	□□□□□ -1.62
SEC59	YMR013C	POB3	Q04636	552 aa	Known RBP	4.96	□□□□□ -1.62
SEC59	YMR013C	RPS31	P05759	152 aa	Known RBP	4.95	□□□□□ -1.62
SEC59	YMR013C	KAP122	P32767	1081 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	SHM1	P37292	490 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC59	YMR013C	ISW1	P38144	1129 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	SSN3	P39073	555 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	YTA6	P40328	754 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	JJJ2	P46997	583 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	TIM54	P47045	478 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	OPI10	Q08202	246 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	YKL069W	P36088	180 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	SPF1	P39986	1215 aa	Known RBP	4.95	□□□□□ -1.62
SEC59	YMR013C	PIC2	P40035	300 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	YJR008W	P47085	338 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	LYS5	P50113	272 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	YGR053C	P53234	283 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	CTR9	P89105	1077 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	ULP1	Q02724	621 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	ADI1	Q03677	179 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	YOR296W	Q08748	1289 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	DPH6	Q12429	685 aa		4.95	□□□□□ -1.62
SEC59	YMR013C	COB	P00163	385 aa		4.94	□□□□□ -1.62
SEC59	YMR013C	RPC31	P17890	251 aa		4.94	□□□□□ -1.62
SEC59	YMR013C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SEC59	YMR013C	YBR287W	P38355	427 aa		4.94	□□□□□ -1.62
SEC59	YMR013C	NUP82	P40368	713 aa		4.94	□□□□□ -1.62
SEC59	YMR013C	PPM2	Q08282	695 aa		4.94	□□□□□ -1.62
SEC59	YMR013C	FAL1	Q12099	399 aa	Known RBP	4.94	□□□□□ -1.62
SEC59	YMR013C	MET6	P05694	767 aa	Known RBP	4.93	□□□□□ -1.62
SEC59	YMR013C	GCR1	P07261	785 aa		4.93	□□□□□ -1.62
SEC59	YMR013C	ECM2	P38241	364 aa	Known RBP	4.93	□□□□□ -1.62
SEC59	YMR013C	AIM46	P38885	310 aa		4.93	□□□□□ -1.62
SEC59	YMR013C	MNN1	P39106	762 aa		4.93	□□□□□ -1.62
SEC59	YMR013C	ATG36	P46983	293 aa		4.93	□□□□□ -1.62
SEC59	YMR013C	MSN5	P52918	1224 aa		4.93	□□□□□ -1.62
SEC59	YMR013C	TOP1	P04786	769 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	TIM23	P32897	222 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	UBP15	P50101	1230 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	NUT1	P53114	1132 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	TYW3	P53177	273 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	CUZ1	P53899	274 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	EMG1	Q06287	252 aa	Known RBP	4.92	□□□□□ -1.62
SEC59	YMR013C	RTT10	Q08924	1013 aa		4.92	□□□□□ -1.62
SEC59	YMR013C	BAS1	P22035	811 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	IRE1	P32361	1115 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	DUR3	P33413	735 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	TOM20	P35180	183 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	AHP1	P38013	176 aa	Known RBP	4.91	□□□□□ -1.62
SEC59	YMR013C	JJJ3	P47138	172 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	YJR142W	P47173	342 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	RTS3	P53289	263 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	UBX5	Q06682	500 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	MRL1	Q06815	381 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	YGR161W-C	Q3E744	92 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	PHO8	P11491	566 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	PYC2	P32327	1180 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 279.4 ms