RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeast

Gene PDP3, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDP3	YLR455W	PGM1	P33401	570 aa	Known RBP	4.83	□□□□□ -1.64
PDP3	YLR455W	SSF1	P38789	453 aa	Predicted RBP	4.83	□□□□□ -1.64
PDP3	YLR455W	RAD55	P38953	406 aa		4.83	□□□□□ -1.64
PDP3	YLR455W	HAT1	Q12341	374 aa		4.83	□□□□□ -1.64
PDP3	YLR455W	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	RSC6	P25632	483 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	SMC1	P32908	1225 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	TFA2	P36145	328 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	GUP1	P53154	560 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	DSE4	P53753	1117 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	ALD3	P54114	506 aa		4.82	□□□□□ -1.64
PDP3	YLR455W	NOP8	Q08287	484 aa	Predicted RBP	4.82	□□□□□ -1.64
PDP3	YLR455W	TY1A-NL1	Q12391	440 aa	Known RBP	4.82	□□□□□ -1.64
PDP3	YLR455W	TIF6	Q12522	245 aa	Known RBP	4.82	□□□□□ -1.64
PDP3	YLR455W	IRS4	P36115	615 aa	Known RBP	4.81	□□□□□ -1.64
PDP3	YLR455W	PAN5	P38787	379 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	ERP5	P38819	212 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	PSY2	P40164	858 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	MDJ2	P42834	146 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	ALO1	P54783	526 aa	Known RBP	4.81	□□□□□ -1.64
PDP3	YLR455W	SOG2	Q08817	791 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	YBL113C	Q7M4S9	792 aa		4.81	□□□□□ -1.64
PDP3	YLR455W	COQ2	P32378	372 aa		4.8	□□□□□ -1.64
PDP3	YLR455W	MAC1	P35192	417 aa		4.8	□□□□□ -1.64
PDP3	YLR455W	QDR1	P40475	563 aa		4.8	□□□□□ -1.64
PDP3	YLR455W	LEM3	P42838	414 aa		4.8	□□□□□ -1.64
PDP3	YLR455W	STM1	P39015	273 aa	Known RBP	4.79	□□□□□ -1.64
PDP3	YLR455W	OMA1	P36163	345 aa		4.78	□□□□□ -1.64
PDP3	YLR455W	GLO3	P38682	493 aa	Known RBP	4.78	□□□□□ -1.64
PDP3	YLR455W	UFD2	P54860	961 aa		4.78	□□□□□ -1.64
PDP3	YLR455W	RSC4	Q02206	625 aa		4.78	□□□□□ -1.64
PDP3	YLR455W	PYC2	P32327	1180 aa	Known RBP	4.77	□□□□□ -1.65
PDP3	YLR455W	KAE1	P36132	386 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	POL5	P39985	1022 aa	Known RBP	4.77	□□□□□ -1.65
PDP3	YLR455W	YJR124C	P47159	448 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	INP52	P50942	1183 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	YNR065C	P53751	1116 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	YML020W	Q03722	664 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	SPO71	Q03868	1245 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	TRS120	Q04183	1289 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	MNL2	Q12205	849 aa		4.77	□□□□□ -1.65
PDP3	YLR455W	SLD2	P34252	453 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	MAE1	P36013	669 aa	Known RBP	4.76	□□□□□ -1.65
PDP3	YLR455W	SAF1	P38352	637 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	AKR1	P39010	764 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	NEO1	P40527	1151 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	REC8	Q12188	680 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	YLR122C	Q12312	125 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	GLO4	Q12320	285 aa		4.76	□□□□□ -1.65
PDP3	YLR455W	HVG1	P0CE11	249 aa		4.75	□□□□□ -1.65
PDP3	YLR455W	NAM7	P30771	971 aa	Known RBP	4.75	□□□□□ -1.65
PDP3	YLR455W	GRS1	P38088	690 aa	Known RBP	4.75	□□□□□ -1.65
PDP3	YLR455W	SEN54	Q02825	467 aa	Predicted RBP	4.75	□□□□□ -1.65
PDP3	YLR455W	NUT2	Q06213	157 aa		4.75	□□□□□ -1.65
PDP3	YLR455W	MSC6	Q08818	692 aa	Known RBP	4.75	□□□□□ -1.65
PDP3	YLR455W	ELG1	Q12050	791 aa		4.75	□□□□□ -1.65
PDP3	YLR455W	TRP3	P00937	484 aa		4.74	□□□□□ -1.65
PDP3	YLR455W	CHS2	P14180	963 aa		4.74	□□□□□ -1.65
PDP3	YLR455W	PPX1	P38698	397 aa		4.74	□□□□□ -1.65
PDP3	YLR455W	YNL011C	P53980	444 aa		4.74	□□□□□ -1.65
PDP3	YLR455W	HAS1	Q03532	505 aa	Known RBP	4.74	□□□□□ -1.65
PDP3	YLR455W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
PDP3	YLR455W	MED7	Q08278	222 aa		4.74	□□□□□ -1.65
PDP3	YLR455W	ERS1	P17261	260 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	SEC20	P28791	383 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	YKR073C	P36153	106 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	YHL050C	P38721	697 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	YHR219W	P38900	624 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	FET4	P40988	552 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	NCE103	P53615	221 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	CTR9	P89105	1077 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	FRT1	Q99332	602 aa		4.73	□□□□□ -1.65
PDP3	YLR455W	YGR130C	P53278	816 aa		4.72	□□□□□ -1.65
PDP3	YLR455W	CDC55	Q00362	526 aa		4.72	□□□□□ -1.65
PDP3	YLR455W	GPI13	Q07830	1017 aa		4.72	□□□□□ -1.65
PDP3	YLR455W	KIP3	P53086	805 aa	Known RBP	4.71	□□□□□ -1.66
PDP3	YLR455W	COB	P00163	385 aa		4.7	□□□□□ -1.66
PDP3	YLR455W	HEM3	P28789	327 aa		4.7	□□□□□ -1.66
PDP3	YLR455W	ECM2	P38241	364 aa	Known RBP	4.7	□□□□□ -1.66
PDP3	YLR455W	TOS1	P38288	455 aa		4.7	□□□□□ -1.66
PDP3	YLR455W	FAR11	P53917	953 aa		4.7	□□□□□ -1.66
PDP3	YLR455W	SPO74	P45819	413 aa		4.69	□□□□□ -1.66
PDP3	YLR455W	CYC7	P00045	113 aa		4.68	□□□□□ -1.66
PDP3	YLR455W	NPR1	P22211	790 aa		4.68	□□□□□ -1.66
PDP3	YLR455W	LIP5	P32875	414 aa		4.68	□□□□□ -1.66
PDP3	YLR455W	YMR074C	Q04773	145 aa		4.68	□□□□□ -1.66
PDP3	YLR455W	GIC2	Q06648	383 aa		4.68	□□□□□ -1.66
PDP3	YLR455W	PHO4	P07270	312 aa	Known RBP	4.67	□□□□□ -1.66
PDP3	YLR455W	MSB1	P21339	1137 aa	Known RBP	4.67	□□□□□ -1.66
PDP3	YLR455W	MET4	P32389	672 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	RIP-Chip
PDP3	YLR455W	DUR3	P33413	735 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	VPS35	P34110	944 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	RIM11	P38615	370 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	CTH1	P47976	325 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	MSH6	Q03834	1242 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	BSC2	Q05611	235 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	YOR223W	Q12015	292 aa		4.67	□□□□□ -1.66
PDP3	YLR455W	CMR1	Q12510	522 aa	Known RBP	4.67	□□□□□ -1.66
PDP3	YLR455W	PRP5	P21372	849 aa	Predicted RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms