RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
PWP1YLR196W PHM6Q05637 104 aa5.87□□□□□ -1.47
PWP1YLR196W ENT2Q05785 613 aa5.87□□□□□ -1.47
PWP1YLR196W ARR2Q06597 130 aa5.87□□□□□ -1.47
PWP1YLR196W TCB1Q12466 1186 aa5.87□□□□□ -1.47
PWP1YLR196W RAD50P12753 1312 aa5.87□□□□□ -1.47
PWP1YLR196W CYB2P00175 591 aa5.86□□□□□ -1.47
PWP1YLR196W PSE1P32337 1089 aaKnown RBP5.86□□□□□ -1.47
PWP1YLR196W MET1P36150 593 aa5.86□□□□□ -1.47
PWP1YLR196W DNM1P54861 757 aa5.86□□□□□ -1.47
PWP1YLR196W MDM1Q01846 1127 aa5.86□□□□□ -1.47
PWP1YLR196W PNG1Q02890 363 aa5.86□□□□□ -1.47
PWP1YLR196W SPO19Q03029 223 aa5.86□□□□□ -1.47
PWP1YLR196W RSM28Q03430 361 aa5.86□□□□□ -1.47
PWP1YLR196W PMT7Q06644 662 aa5.86□□□□□ -1.47
PWP1YLR196W TRM3Q07527 1436 aa5.86□□□□□ -1.47
PWP1YLR196W PCT1P13259 424 aa5.85□□□□□ -1.47
PWP1YLR196W PUF4P25339 888 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47 RIP-Chip
PWP1YLR196W RME1P32338 300 aaKnown RBP5.85□□□□□ -1.47
PWP1YLR196W DPH5P32469 300 aaPredicted RBP5.85□□□□□ -1.47
PWP1YLR196W ERC1P38767 581 aa5.85□□□□□ -1.47
PWP1YLR196W SHC1P39000 512 aa5.85□□□□□ -1.47
PWP1YLR196W SUM1P46676 1062 aa5.85□□□□□ -1.47
PWP1YLR196W INP52P50942 1183 aa5.85□□□□□ -1.47
PWP1YLR196W ESF2P53743 316 aaKnown RBP5.85□□□□□ -1.47
PWP1YLR196W MSH6Q03834 1242 aa5.85□□□□□ -1.47
PWP1YLR196W SSK22P25390 1331 aaPredicted RBP5.85□□□□□ -1.47
PWP1YLR196W MAK16P10962 306 aaPredicted RBP5.85□□□□□ -1.47
PWP1YLR196W SCT1P32784 759 aa5.85□□□□□ -1.47
PWP1YLR196W TYS1P36421 394 aaKnown RBP5.85□□□□□ -1.47
PWP1YLR196W UBP13P38187 747 aa5.85□□□□□ -1.47
PWP1YLR196W ATG14P38270 344 aa5.85□□□□□ -1.47
PWP1YLR196W TCD1P38756 429 aa5.85□□□□□ -1.47
PWP1YLR196W TOM71P38825 639 aaKnown RBP5.85□□□□□ -1.47
PWP1YLR196W SAP155P43612 1002 aa5.85□□□□□ -1.47
PWP1YLR196W OCA1P50946 238 aaPredicted RBP5.85□□□□□ -1.47
PWP1YLR196W VPS20Q04272 221 aa5.85□□□□□ -1.47
PWP1YLR196W SMD2Q06217 110 aaKnown RBP5.85□□□□□ -1.47
PWP1YLR196W SSF2Q12153 453 aaPredicted RBP5.85□□□□□ -1.47
PWP1YLR196W KNS1P32350 737 aaPredicted RBP5.84□□□□□ -1.47
PWP1YLR196W BDF1P35817 686 aa5.84□□□□□ -1.47
PWP1YLR196W RTR1P40084 226 aaPredicted RBP5.84□□□□□ -1.47
PWP1YLR196W TPM2P40414 161 aa5.84□□□□□ -1.47
PWP1YLR196W MSN5P52918 1224 aa5.84□□□□□ -1.47
PWP1YLR196W IST1P53843 298 aaPredicted RBP5.84□□□□□ -1.47
PWP1YLR196W DSL1P53847 754 aa5.84□□□□□ -1.47
PWP1YLR196W SPO71Q03868 1245 aa5.84□□□□□ -1.47
PWP1YLR196W COG4Q06096 861 aa5.84□□□□□ -1.47
PWP1YLR196W PET494P07390 489 aaPredicted RBP5.83□□□□□ -1.48
PWP1YLR196W SIT4P20604 311 aa5.83□□□□□ -1.48
PWP1YLR196W PEP12P32854 288 aa5.83□□□□□ -1.48
PWP1YLR196W YEL1P34225 687 aa5.83□□□□□ -1.48
PWP1YLR196W ATG19P35193 415 aa5.83□□□□□ -1.48
PWP1YLR196W PAM1P37304 830 aaKnown RBP5.83□□□□□ -1.48
PWP1YLR196W YRB1P41920 201 aaKnown RBP5.83□□□□□ -1.48
PWP1YLR196W YAF9P53930 226 aa5.83□□□□□ -1.48
PWP1YLR196W VTI1Q04338 217 aa5.83□□□□□ -1.48
PWP1YLR196W TAP42Q04372 366 aa5.83□□□□□ -1.48
PWP1YLR196W ITT1Q04638 464 aa5.83□□□□□ -1.48
PWP1YLR196W CDC3P32457 520 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W DLD1P32891 587 aa5.82□□□□□ -1.48
PWP1YLR196W ETP1P38748 585 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W ILV3P39522 585 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W ARB1P40024 610 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W YIL092WP40497 633 aa5.82□□□□□ -1.48
PWP1YLR196W BUD27P43573 796 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
PWP1YLR196W ARO80Q04052 950 aa5.82□□□□□ -1.48
PWP1YLR196W ERB1Q04660 807 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W SSQ1Q05931 657 aaPredicted RBP5.82□□□□□ -1.48
PWP1YLR196W YRM1Q12340 786 aa5.82□□□□□ -1.48
PWP1YLR196W KRE5P22023 1365 aa5.82□□□□□ -1.48
PWP1YLR196W RPB4P20433 221 aaPredicted RBP5.82□□□□□ -1.48
PWP1YLR196W TPD3P31383 635 aa5.82□□□□□ -1.48
PWP1YLR196W NIP100P33420 868 aa5.82□□□□□ -1.48
PWP1YLR196W TBS1P38114 1094 aa5.82□□□□□ -1.48
PWP1YLR196W MEF2P39677 819 aa5.82□□□□□ -1.48
PWP1YLR196W RIO2P40160 425 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W ALD4P46367 519 aaKnown RBP5.82□□□□□ -1.48
PWP1YLR196W POL32P47110 350 aa5.82□□□□□ -1.48
PWP1YLR196W SNZ1Q03148 297 aa5.82□□□□□ -1.48
PWP1YLR196W CIR2Q08822 631 aa5.82□□□□□ -1.48
PWP1YLR196W MER1P16523 270 aa5.81□□□□□ -1.48
PWP1YLR196W SEC15P22224 910 aa5.81□□□□□ -1.48
PWP1YLR196W RKM3P38222 552 aa5.81□□□□□ -1.48
PWP1YLR196W CIC1P38779 376 aaKnown RBP5.81□□□□□ -1.48
PWP1YLR196W MET18P40469 1032 aa5.81□□□□□ -1.48
PWP1YLR196W RAD17P48581 401 aa5.81□□□□□ -1.48
PWP1YLR196W PEX21P50091 288 aa5.81□□□□□ -1.48
PWP1YLR196W RTC4P53850 401 aa5.81□□□□□ -1.48
PWP1YLR196W YMR102CQ03177 834 aa5.81□□□□□ -1.48
PWP1YLR196W CAB1Q04430 367 aa5.81□□□□□ -1.48
PWP1YLR196W THI22Q06490 572 aa5.81□□□□□ -1.48
PWP1YLR196W DNL4Q08387 944 aaPredicted RBP5.81□□□□□ -1.48
PWP1YLR196W SWI1P09547 1314 aa5.8□□□□□ -1.48
PWP1YLR196W STE11P23561 717 aa5.8□□□□□ -1.48
PWP1YLR196W MSP1P28737 362 aa5.8□□□□□ -1.48
PWP1YLR196W ACP1P32463 125 aa5.8□□□□□ -1.48
PWP1YLR196W PPX1P38698 397 aa5.8□□□□□ -1.48
PWP1YLR196W VPS41P38959 992 aa5.8□□□□□ -1.48
PWP1YLR196W ENP2P48234 707 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 101.3 ms