RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C HAP4P14064 554 aa5.46□□□□□ -1.54
SDO1YLR022C RGP1P16664 663 aa5.46□□□□□ -1.54
SDO1YLR022C MET1P36150 593 aa5.46□□□□□ -1.54
SDO1YLR022C PRY1P47032 299 aa5.46□□□□□ -1.54
SDO1YLR022C GAS4Q08271 471 aa5.46□□□□□ -1.54
SDO1YLR022C CYT1P07143 309 aa5.45□□□□□ -1.54
SDO1YLR022C GAL2P13181 574 aa5.45□□□□□ -1.54
SDO1YLR022C UBP1P25037 809 aa5.45□□□□□ -1.54
SDO1YLR022C TGL4P36165 910 aa5.45□□□□□ -1.54
SDO1YLR022C TAT1P38085 619 aa5.45□□□□□ -1.54
SDO1YLR022C ARO1P08566 1588 aaKnown RBP5.45□□□□□ -1.54
SDO1YLR022C IQG1Q12280 1495 aa5.45□□□□□ -1.54
SDO1YLR022C MYO4P32492 1471 aa5.44□□□□□ -1.54
SDO1YLR022C MTO1P53070 669 aa5.43□□□□□ -1.54
SDO1YLR022C YOR1P53049 1477 aa5.43□□□□□ -1.54
SDO1YLR022C GDB1Q06625 1536 aa5.43□□□□□ -1.54
SDO1YLR022C INP52P50942 1183 aa5.42□□□□□ -1.54
SDO1YLR022C ROM1P53046 1155 aa5.42□□□□□ -1.54
SDO1YLR022C POL1P13382 1468 aa5.41□□□□□ -1.54
SDO1YLR022C CPS1P27614 576 aa5.41□□□□□ -1.54
SDO1YLR022C ALO1P54783 526 aaKnown RBP5.41□□□□□ -1.54
SDO1YLR022C MAK10Q02197 733 aa5.41□□□□□ -1.54
SDO1YLR022C YTA7P40340 1379 aa5.41□□□□□ -1.54
SDO1YLR022C BNR1P40450 1375 aa5.41□□□□□ -1.54
SDO1YLR022C SNQ2P32568 1501 aaKnown RBP5.39□□□□□ -1.55
SDO1YLR022C RPP1AP05318 106 aaPredicted RBP5.39□□□□□ -1.55
SDO1YLR022C PUP1P25043 261 aa5.39□□□□□ -1.55
SDO1YLR022C NGR1P32831 672 aaKnown RBP5.39□□□□□ -1.55
SDO1YLR022C OMA1P36163 345 aa5.39□□□□□ -1.55
SDO1YLR022C PGM2P37012 569 aaKnown RBP5.39□□□□□ -1.55
SDO1YLR022C UTP4Q06679 776 aaKnown RBP5.39□□□□□ -1.55
SDO1YLR022C PDR12Q02785 1511 aa5.38□□□□□ -1.55
SDO1YLR022C SSA4P22202 642 aaKnown RBP5.38□□□□□ -1.55
SDO1YLR022C ALG14P38242 237 aa5.38□□□□□ -1.55
SDO1YLR022C YAP3P38749 330 aa5.38□□□□□ -1.55
SDO1YLR022C ECM23Q02710 187 aa5.38□□□□□ -1.55
SDO1YLR022C RLF2Q12495 606 aa5.38□□□□□ -1.55
SDO1YLR022C BUD3P25558 1636 aa5.37□□□□□ -1.55
SDO1YLR022C VAN1P23642 535 aa5.37□□□□□ -1.55
SDO1YLR022C SCD5P34758 872 aa5.37□□□□□ -1.55
SDO1YLR022C PRK1P40494 810 aa5.37□□□□□ -1.55
SDO1YLR022C CUS1Q02554 436 aaPredicted RBP5.37□□□□□ -1.55
SDO1YLR022C HXT5P38695 592 aa5.36□□□□□ -1.55
SDO1YLR022C NHA1Q99271 985 aa5.36□□□□□ -1.55
SDO1YLR022C NUP157P40064 1391 aaKnown RBP5.36□□□□□ -1.55
SDO1YLR022C STU1P38198 1513 aa5.36□□□□□ -1.55
SDO1YLR022C CHC1P22137 1653 aaKnown RBP5.35□□□□□ -1.55
SDO1YLR022C NCL1P38205 684 aaKnown RBP5.35□□□□□ -1.55
SDO1YLR022C UBX7P38349 436 aa5.35□□□□□ -1.55
SDO1YLR022C TRS33Q99394 268 aa5.35□□□□□ -1.55
SDO1YLR022C USO1P25386 1790 aa5.34□□□□□ -1.55
SDO1YLR022C TY3B-GQ99315 1547 aa5.34□□□□□ -1.55
SDO1YLR022C NAR1P23503 491 aaKnown RBP5.34□□□□□ -1.55
SDO1YLR022C SUV3P32580 737 aa5.34□□□□□ -1.55
SDO1YLR022C TPS3P38426 1054 aaKnown RBP5.34□□□□□ -1.55
SDO1YLR022C YNR040WP53736 256 aa5.34□□□□□ -1.55
SDO1YLR022C HEH2Q03281 663 aa5.34□□□□□ -1.55
SDO1YLR022C GAS5Q08193 484 aa5.34□□□□□ -1.55
SDO1YLR022C MLP2P40457 1679 aa5.34□□□□□ -1.56
SDO1YLR022C THI12P42883 340 aa5.33□□□□□ -1.56
SDO1YLR022C THI5P43534 340 aa5.33□□□□□ -1.56
SDO1YLR022C THI11P47183 340 aa5.33□□□□□ -1.56
SDO1YLR022C PUF6Q04373 656 aaKnown RBP5.33□□□□□ -1.56
SDO1YLR022C THI13Q07748 340 aa5.33□□□□□ -1.56
SDO1YLR022C NOB1Q08444 459 aaKnown RBP5.33□□□□□ -1.56
SDO1YLR022C YSP2Q06681 1438 aa5.32□□□□□ -1.56
SDO1YLR022C KAP122P32767 1081 aa5.32□□□□□ -1.56
SDO1YLR022C SKP1P52286 194 aa5.32□□□□□ -1.56
SDO1YLR022C CWH41P53008 833 aa5.32□□□□□ -1.56
SDO1YLR022C BUD9P53226 547 aa5.32□□□□□ -1.56
SDO1YLR022C CAB1Q04430 367 aa5.32□□□□□ -1.56
SDO1YLR022C STH1P32597 1359 aa5.31□□□□□ -1.56
SDO1YLR022C QDR2P40474 542 aa5.31□□□□□ -1.56
SDO1YLR022C GIS4Q04233 774 aa5.31□□□□□ -1.56
SDO1YLR022C YML083CQ04526 418 aa5.31□□□□□ -1.56
SDO1YLR022C MRP10O75012 95 aa5.3□□□□□ -1.56
SDO1YLR022C APM2P38700 605 aa5.3□□□□□ -1.56
SDO1YLR022C AVT1P47082 602 aa5.3□□□□□ -1.56
SDO1YLR022C RPC31P17890 251 aa5.29□□□□□ -1.56
SDO1YLR022C RRM3P38766 723 aa5.29□□□□□ -1.56
SDO1YLR022C ALD4P46367 519 aaKnown RBP5.29□□□□□ -1.56
SDO1YLR022C SUB2Q07478 446 aaKnown RBP5.29□□□□□ -1.56
SDO1YLR022C FOX2Q02207 900 aaKnown RBP5.28□□□□□ -1.56
SDO1YLR022C CWC15Q03772 175 aaKnown RBP5.28□□□□□ -1.56
SDO1YLR022C SRS2P12954 1174 aa5.27□□□□□ -1.57
SDO1YLR022C MRPL33P20084 86 aa5.27□□□□□ -1.57
SDO1YLR022C NAB2P32505 525 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SDO1YLR022C YBR197CP38306 217 aa5.27□□□□□ -1.57
SDO1YLR022C IDI1P15496 288 aa5.26□□□□□ -1.57
SDO1YLR022C PUN1Q06991 263 aa5.26□□□□□ -1.57
SDO1YLR022C AI3P03877 415 aa5.25□□□□□ -1.57
SDO1YLR022C VMA3P25515 160 aa5.25□□□□□ -1.57
SDO1YLR022C ITC1P53125 1264 aa5.25□□□□□ -1.57
SDO1YLR022C ISC10P32645 267 aa5.24□□□□□ -1.57
SDO1YLR022C SAC7P17121 654 aa5.23□□□□□ -1.57
SDO1YLR022C BSD2P38356 321 aa5.23□□□□□ -1.57
SDO1YLR022C DYS1P38791 387 aa5.23□□□□□ -1.57
SDO1YLR022C YMR074CQ04773 145 aa5.23□□□□□ -1.57
SDO1YLR022C AOS1Q06624 347 aa5.23□□□□□ -1.57
SDO1YLR022C YOR296WQ08748 1289 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms