RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C MSB1P21339 1137 aaKnown RBP6.82□□□□□ -1.32
TVP38YKR088C MSN1P22148 382 aa6.81□□□□□ -1.32
TVP38YKR088C MAE1P36013 669 aaKnown RBP6.81□□□□□ -1.32
TVP38YKR088C SKI3P17883 1432 aaKnown RBP6.81□□□□□ -1.32
TVP38YKR088C ISC10P32645 267 aa6.8□□□□□ -1.32
TVP38YKR088C ALD4P46367 519 aaKnown RBP6.8□□□□□ -1.32
TVP38YKR088C UBP5P39944 805 aa6.79□□□□□ -1.32
TVP38YKR088C FIR1P40020 876 aa6.79□□□□□ -1.32
TVP38YKR088C BIO5P53744 561 aaKnown RBP6.79□□□□□ -1.32
TVP38YKR088C SOG2Q08817 791 aa6.79□□□□□ -1.32
TVP38YKR088C TTI1P36097 1038 aa6.78□□□□□ -1.32
TVP38YKR088C SPT6P23615 1451 aaKnown RBP6.78□□□□□ -1.32
TVP38YKR088C POL5P39985 1022 aaKnown RBP6.77□□□□□ -1.33
TVP38YKR088C NCE103P53615 221 aa6.77□□□□□ -1.33
TVP38YKR088C EMG1Q06287 252 aaKnown RBP6.77□□□□□ -1.33
TVP38YKR088C SPO71Q03868 1245 aa6.76□□□□□ -1.33
TVP38YKR088C AIM46P38885 310 aa6.75□□□□□ -1.33
TVP38YKR088C PUN1Q06991 263 aa6.75□□□□□ -1.33
TVP38YKR088C FUS1P11710 512 aa6.74□□□□□ -1.33
TVP38YKR088C RNQ1P25367 405 aa6.74□□□□□ -1.33
TVP38YKR088C TFA2P36145 328 aa6.74□□□□□ -1.33
TVP38YKR088C ALD3P54114 506 aa6.74□□□□□ -1.33
TVP38YKR088C PUF6Q04373 656 aaKnown RBP6.74□□□□□ -1.33
TVP38YKR088C ELG1Q12050 791 aa6.74□□□□□ -1.33
TVP38YKR088C HIR3P47171 1648 aa6.72□□□□□ -1.33
TVP38YKR088C NEO1P40527 1151 aa6.72□□□□□ -1.33
TVP38YKR088C HXT8P40886 569 aa6.72□□□□□ -1.33
TVP38YKR088C SDH1Q00711 640 aa6.72□□□□□ -1.33
TVP38YKR088C GIC2Q06648 383 aa6.72□□□□□ -1.33
TVP38YKR088C SEG2P34250 1132 aa6.7□□□□□ -1.34
TVP38YKR088C XRN1P22147 1528 aaKnown RBP6.7□□□□□ -1.34
TVP38YKR088C SRS2P12954 1174 aa6.69□□□□□ -1.34
TVP38YKR088C SEA4P38164 1038 aa6.69□□□□□ -1.34
TVP38YKR088C ECL1P48235 211 aa6.69□□□□□ -1.34
TVP38YKR088C KIP3P53086 805 aaKnown RBP6.69□□□□□ -1.34
TVP38YKR088C CHD1P32657 1468 aa6.68□□□□□ -1.34
TVP38YKR088C ERS1P17261 260 aa6.68□□□□□ -1.34
TVP38YKR088C LRG1P35688 1017 aa6.68□□□□□ -1.34
TVP38YKR088C POL12P38121 705 aaPredicted RBP6.68□□□□□ -1.34
TVP38YKR088C NIT1P40447 199 aa6.68□□□□□ -1.34
TVP38YKR088C CPS1P27614 576 aa6.67□□□□□ -1.34
TVP38YKR088C BOI1P38041 980 aaKnown RBP6.67□□□□□ -1.34
TVP38YKR088C YJR124CP47159 448 aa6.67□□□□□ -1.34
TVP38YKR088C FAR11P53917 953 aa6.67□□□□□ -1.34
TVP38YKR088C NSI1Q12457 570 aa6.67□□□□□ -1.34
TVP38YKR088C GCD1P09032 578 aaPredicted RBP6.66□□□□□ -1.34
TVP38YKR088C PUP1P25043 261 aa6.66□□□□□ -1.34
TVP38YKR088C LEO1P38439 464 aa6.66□□□□□ -1.34
TVP38YKR088C RGD2P43556 714 aa6.66□□□□□ -1.34
TVP38YKR088C YNR065CP53751 1116 aa6.66□□□□□ -1.34
TVP38YKR088C DFG16Q99234 619 aa6.65□□□□□ -1.34
TVP38YKR088C REV3P14284 1504 aa6.65□□□□□ -1.35
TVP38YKR088C SIN3P22579 1536 aa6.65□□□□□ -1.35
TVP38YKR088C NTA1P40354 457 aa6.64□□□□□ -1.35
TVP38YKR088C MMM1P41800 426 aa6.64□□□□□ -1.35
TVP38YKR088C SUT1P53032 299 aaKnown RBP6.64□□□□□ -1.35
TVP38YKR088C HAS1Q03532 505 aaKnown RBP6.64□□□□□ -1.35
TVP38YKR088C PRP43P53131 767 aaKnown RBP6.63□□□□□ -1.35
TVP38YKR088C THO2P53552 1597 aaKnown RBP6.63□□□□□ -1.35
TVP38YKR088C MMS22Q06164 1454 aa6.63□□□□□ -1.35
TVP38YKR088C RRN6P32786 894 aa6.62□□□□□ -1.35
TVP38YKR088C YKL222CP35995 705 aa6.62□□□□□ -1.35
TVP38YKR088C YMR074CQ04773 145 aa6.62□□□□□ -1.35
TVP38YKR088C YOR223WQ12015 292 aa6.62□□□□□ -1.35
TVP38YKR088C RAD55P38953 406 aa6.61□□□□□ -1.35
TVP38YKR088C FET4P40988 552 aa6.61□□□□□ -1.35
TVP38YKR088C CIT3P43635 486 aa6.61□□□□□ -1.35
TVP38YKR088C GLO4Q12320 285 aa6.61□□□□□ -1.35
TVP38YKR088C SSK2P53599 1579 aa6.61□□□□□ -1.35
TVP38YKR088C HVG1P0CE11 249 aa6.6□□□□□ -1.35
TVP38YKR088C DMA2P53924 522 aa6.6□□□□□ -1.35
TVP38YKR088C CWC15Q03772 175 aaKnown RBP6.6□□□□□ -1.35
TVP38YKR088C MON2P48563 1636 aaPredicted RBP6.6□□□□□ -1.35
TVP38YKR088C SWR1Q05471 1514 aa6.6□□□□□ -1.35
TVP38YKR088C GAS1P22146 559 aaKnown RBP6.59□□□□□ -1.35
TVP38YKR088C YCR015CP25616 317 aa6.59□□□□□ -1.35
TVP38YKR088C WHI3P34761 661 aaKnown RBP6.59□□□□□ -1.35
TVP38YKR088C YOR059CQ08448 450 aaKnown RBP6.59□□□□□ -1.35
TVP38YKR088C APC11Q12157 165 aa6.59□□□□□ -1.35
TVP38YKR088C TIF6Q12522 245 aaKnown RBP6.59□□□□□ -1.35
TVP38YKR088C IRS4P36115 615 aaKnown RBP6.58□□□□□ -1.36
TVP38YKR088C PNP1Q05788 311 aa6.58□□□□□ -1.36
TVP38YKR088C SMC1P32908 1225 aa6.57□□□□□ -1.36
TVP38YKR088C KTR2P33550 425 aa6.57□□□□□ -1.36
TVP38YKR088C GPT2P36148 743 aa6.57□□□□□ -1.36
TVP38YKR088C PSY2P40164 858 aa6.57□□□□□ -1.36
TVP38YKR088C YLL054CQ12244 843 aa6.57□□□□□ -1.36
TVP38YKR088C YHL008CP38750 627 aa6.56□□□□□ -1.36
TVP38YKR088C RCM1P53972 490 aa6.56□□□□□ -1.36
TVP38YKR088C PYC2P32327 1180 aaKnown RBP6.55□□□□□ -1.36
TVP38YKR088C HSP78P33416 811 aa6.54□□□□□ -1.36
TVP38YKR088C ESC8Q08119 714 aa6.54□□□□□ -1.36
TVP38YKR088C RPB10P22139 70 aa6.53□□□□□ -1.36
TVP38YKR088C DOT1Q04089 582 aaKnown RBP6.53□□□□□ -1.36
TVP38YKR088C YML083CQ04526 418 aa6.51□□□□□ -1.37
TVP38YKR088C MYO2P19524 1574 aaKnown RBP6.51□□□□□ -1.37
TVP38YKR088C ESP1Q03018 1630 aa6.5□□□□□ -1.37
TVP38YKR088C GCV1P48015 400 aa6.5□□□□□ -1.37
TVP38YKR088C CDA2Q06703 312 aa6.5□□□□□ -1.37
TVP38YKR088C LSO1Q3E827 93 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms