RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	ERF2	Q06551	359 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	CCP1	P00431	361 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	PRE9	P23638	258 aa	Known RBP	6.01	□□□□□ -1.45
SIS2	YKR072C	IES5	P40060	125 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	SND1	Q04007	877 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	FAL1	Q12099	399 aa	Known RBP	6.01	□□□□□ -1.45
SIS2	YKR072C	NFU1	P32860	256 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	YKL069W	P36088	180 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	HAL5	P38970	855 aa	Known RBP	6.01	□□□□□ -1.45
SIS2	YKR072C	VID27	P40157	782 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	STR2	P47164	639 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	HDA3	Q06623	655 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	YPR097W	Q06839	1073 aa		6.01	□□□□□ -1.45
SIS2	YKR072C	CIT1	P00890	479 aa		6	□□□□□ -1.45
SIS2	YKR072C	CAN1	P04817	590 aa		6	□□□□□ -1.45
SIS2	YKR072C	YEF3	P16521	1044 aa	Known RBP	6	□□□□□ -1.45
SIS2	YKR072C	YJR115W	P47152	169 aa		6	□□□□□ -1.45
SIS2	YKR072C	PMT3	P47190	753 aa		6	□□□□□ -1.45
SIS2	YKR072C	SUT1	P53032	299 aa	Known RBP	6	□□□□□ -1.45
SIS2	YKR072C	ISR1	Q06098	443 aa	Known RBP	6	□□□□□ -1.45
SIS2	YKR072C	ATG13	Q06628	738 aa		6	□□□□□ -1.45
SIS2	YKR072C	ALR1	Q08269	859 aa		6	□□□□□ -1.45
SIS2	YKR072C	REC8	Q12188	680 aa		6	□□□□□ -1.45
SIS2	YKR072C	HSP60	P19882	572 aa	Known RBP	5.99	□□□□□ -1.45
SIS2	YKR072C	YJR120W	P47157	116 aa		5.99	□□□□□ -1.45
SIS2	YKR072C	CAB1	Q04430	367 aa		5.99	□□□□□ -1.45
SIS2	YKR072C	DAL4	Q04895	635 aa		5.99	□□□□□ -1.45
SIS2	YKR072C	BSC2	Q05611	235 aa		5.99	□□□□□ -1.45
SIS2	YKR072C	RPS6A	P0CX37	236 aa	Known RBP	5.98	□□□□□ -1.45
SIS2	YKR072C	RPS6B	P0CX38	236 aa	Predicted RBP	5.98	□□□□□ -1.45
SIS2	YKR072C	KIP2	P28743	706 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	DUT1	P33317	147 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	IXR1	P33417	597 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	YBR184W	P38299	523 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	MDM1	Q01846	1127 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	TFB2	Q02939	513 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	SRF1	Q12516	437 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	NUP145	P49687	1317 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	NUD1	P32336	851 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	SMC1	P32908	1225 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	RSC4	Q02206	625 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	UGO1	Q03327	502 aa		5.98	□□□□□ -1.45
SIS2	YKR072C	PIF1	P07271	859 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	BAS1	P22035	811 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	RPL8B	P29453	256 aa	Known RBP	5.97	□□□□□ -1.45
SIS2	YKR072C	NPL4	P33755	580 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	UBX4	P54730	416 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	ALO1	P54783	526 aa	Known RBP	5.97	□□□□□ -1.45
SIS2	YKR072C	DPL1	Q05567	589 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	ESC2	Q06340	456 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	RTT10	Q08924	1013 aa		5.97	□□□□□ -1.45
SIS2	YKR072C	PGI1	P12709	554 aa	Known RBP	5.96	□□□□□ -1.46
SIS2	YKR072C	YKL222C	P35995	705 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	JNM1	P36224	373 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	MAL31	P38156	614 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	GEM1	P39722	662 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	YEL023C	P39992	682 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	PEA2	P40091	420 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	HOS4	P40480	1083 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	RRI2	Q12348	645 aa		5.96	□□□□□ -1.46
SIS2	YKR072C	OPI1	P21957	404 aa		5.95	□□□□□ -1.46
SIS2	YKR072C	STE5	P32917	917 aa		5.95	□□□□□ -1.46
SIS2	YKR072C	KTR2	P33550	425 aa		5.95	□□□□□ -1.46
SIS2	YKR072C	HUL4	P40985	892 aa		5.95	□□□□□ -1.46
SIS2	YKR072C	MPP10	P47083	593 aa	Known RBP	5.95	□□□□□ -1.46
SIS2	YKR072C	ERP6	P53198	216 aa		5.95	□□□□□ -1.46
SIS2	YKR072C	INH1	P01097	85 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	KAR2	P16474	682 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	MRS6	P32864	603 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	TRZ1	P36159	838 aa	Predicted RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	YAP1801	P38856	637 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	GPP1	P41277	250 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	AGE1	Q04412	482 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	YDR344C	Q05510	147 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	YCS4	Q06156	1176 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	SNU66	Q12420	587 aa	Predicted RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	SWI5	P08153	709 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	MPH2	P0CD99	609 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	SST2	P11972	698 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	HSC82	P15108	705 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	ARE1	P25628	610 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	SSH4	P32343	579 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	PRP40	P33203	583 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	PEX6	P33760	1030 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	TFC3	P34111	1160 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	UME1	Q03010	460 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	EAF1	Q06337	982 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	THI73	Q07904	523 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	FMP25	Q08023	583 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	INP54	Q08227	384 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	TMA46	Q12000	345 aa	Known RBP	5.94	□□□□□ -1.46
SIS2	YKR072C	ISU2	Q12056	156 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	RTP1	Q12751	981 aa		5.94	□□□□□ -1.46
SIS2	YKR072C	PTH2	P34222	208 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	IRR1	P40541	1150 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	PEX14	P53112	341 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	COG6	P53959	839 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	MEH1	Q02205	184 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	YPL109C	Q02981	657 aa		5.93	□□□□□ -1.46
SIS2	YKR072C	FAP7	Q12055	197 aa	Predicted RBP	5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms