RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W LYS4P49367 693 aaPredicted RBP2.86□□□□□ -1.95
NUP100YKL068W RTF1P53064 558 aa2.86□□□□□ -1.95
NUP100YKL068W NOC2P39744 710 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W NPR2P39923 615 aa2.85□□□□□ -1.95
NUP100YKL068W NOP2P40991 618 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
NUP100YKL068W YPP1P46951 817 aa2.85□□□□□ -1.95
NUP100YKL068W IOC2Q12072 812 aa2.85□□□□□ -1.95
NUP100YKL068W URB1P34241 1764 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W THS1P04801 734 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W SLY41P22215 453 aa2.85□□□□□ -1.95
NUP100YKL068W CRP1P38845 465 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W RPS26AP39938 119 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W RPS26BP39939 119 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W EMP47P43555 445 aa2.85□□□□□ -1.95
NUP100YKL068W YJL171CP46992 396 aa2.85□□□□□ -1.95
NUP100YKL068W YJL049WP47048 450 aa2.85□□□□□ -1.95
NUP100YKL068W SQS1P53866 767 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W SVL3Q03088 825 aaKnown RBP2.85□□□□□ -1.95
NUP100YKL068W AGE1Q04412 482 aa2.85□□□□□ -1.95
NUP100YKL068W TRP5P00931 707 aaKnown RBP2.84□□□□□ -1.95
NUP100YKL068W CLN2P20438 545 aa2.84□□□□□ -1.95
NUP100YKL068W SRM1P21827 482 aa2.84□□□□□ -1.95
NUP100YKL068W GRX1P25373 110 aaKnown RBP2.84□□□□□ -1.95
NUP100YKL068W RAD27P26793 382 aa2.84□□□□□ -1.95
NUP100YKL068W APL6P46682 809 aa2.84□□□□□ -1.95
NUP100YKL068W ACS2P52910 683 aaKnown RBP2.84□□□□□ -1.95
NUP100YKL068W ROM1P53046 1155 aa2.84□□□□□ -1.95
NUP100YKL068W NAF1P53919 492 aaKnown RBP2.84□□□□□ -1.95
NUP100YKL068W YNL115CP53925 644 aa2.84□□□□□ -1.95
NUP100YKL068W VPS27P40343 622 aaKnown RBP2.84□□□□□ -1.96
NUP100YKL068W ACF4P47129 309 aa2.84□□□□□ -1.96
NUP100YKL068W ITC1P53125 1264 aa2.84□□□□□ -1.96
NUP100YKL068W YGL081WP53156 320 aa2.84□□□□□ -1.96
NUP100YKL068W GPI13Q07830 1017 aa2.84□□□□□ -1.96
NUP100YKL068W VPS24P36095 224 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W ENP1P38333 483 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W BSD2P38356 321 aa2.83□□□□□ -1.96
NUP100YKL068W POL5P39985 1022 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W VNX1P42839 908 aa2.83□□□□□ -1.96
NUP100YKL068W DAK2P43550 591 aa2.83□□□□□ -1.96
NUP100YKL068W ESF1Q06344 628 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W ERF2Q06551 359 aa2.83□□□□□ -1.96
NUP100YKL068W YPR084WQ06821 456 aa2.83□□□□□ -1.96
NUP100YKL068W MPC54Q08550 464 aa2.83□□□□□ -1.96
NUP100YKL068W TUM1Q08686 304 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W NKP1Q12493 238 aa2.83□□□□□ -1.96
NUP100YKL068W RAD9P14737 1309 aa2.83□□□□□ -1.96
NUP100YKL068W RPP1BP10622 106 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W PHO8P11491 566 aa2.83□□□□□ -1.96
NUP100YKL068W PRI2P20457 528 aa2.83□□□□□ -1.96
NUP100YKL068W PWP2P25635 923 aaKnown RBP2.83□□□□□ -1.96
NUP100YKL068W TAT2P38967 592 aa2.83□□□□□ -1.96
NUP100YKL068W MID1P41821 548 aa2.83□□□□□ -1.96
NUP100YKL068W JIP4Q03361 876 aa2.83□□□□□ -1.96
NUP100YKL068W DPL1Q05567 589 aa2.83□□□□□ -1.96
NUP100YKL068W SRS2P12954 1174 aa2.82□□□□□ -1.96
NUP100YKL068W RAD4P14736 754 aa2.82□□□□□ -1.96
NUP100YKL068W SEC2P17065 759 aa2.82□□□□□ -1.96
NUP100YKL068W PHO87P25360 923 aa2.82□□□□□ -1.96
NUP100YKL068W RPS0BP46654 252 aaKnown RBP2.82□□□□□ -1.96
NUP100YKL068W TIM54P47045 478 aa2.82□□□□□ -1.96
NUP100YKL068W PEX8P53248 589 aa2.82□□□□□ -1.96
NUP100YKL068W CEF1Q03654 590 aaPredicted RBP2.82□□□□□ -1.96
NUP100YKL068W MTC5Q03897 1148 aa2.82□□□□□ -1.96
NUP100YKL068W PPM2Q08282 695 aa2.82□□□□□ -1.96
NUP100YKL068W ADR1P07248 1323 aa2.82□□□□□ -1.96
NUP100YKL068W PHO4P07270 312 aaKnown RBP2.82□□□□□ -1.96
NUP100YKL068W RPN12P32496 274 aa2.82□□□□□ -1.96
NUP100YKL068W PET112P33893 541 aa2.82□□□□□ -1.96
NUP100YKL068W TRM1P15565 570 aaKnown RBP2.82□□□□□ -1.96
NUP100YKL068W RAM1P22007 431 aa2.82□□□□□ -1.96
NUP100YKL068W THI4P32318 326 aa2.82□□□□□ -1.96
NUP100YKL068W EAP1P36041 632 aaKnown RBP2.82□□□□□ -1.96
NUP100YKL068W UTP14Q04500 899 aaKnown RBP2.82□□□□□ -1.96
NUP100YKL068W YOR378WQ08902 515 aa2.82□□□□□ -1.96
NUP100YKL068W TY1A-DR4O74302 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-HP0C2I4 478 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W TY1A-AP0CX57 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-PR1P0CX58 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-ORP0CX59 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-PR2P0CX60 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-DR5P0CX65 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-ER2P0CX66 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-GR3P0CX67 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-LR1P0CX68 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-MR2P0CX69 440 aa2.81□□□□□ -1.96
NUP100YKL068W PDI1P17967 522 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W RTT106P40161 455 aa2.81□□□□□ -1.96
NUP100YKL068W FKH1P40466 484 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-JR2P47099 440 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-DR1Q03856 440 aa2.81□□□□□ -1.96
NUP100YKL068W SPO20Q04359 397 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-ML1Q04706 440 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W TY1A-BRQ12217 440 aa2.81□□□□□ -1.96
NUP100YKL068W ERP4Q12450 207 aa2.81□□□□□ -1.96
NUP100YKL068W TY1A-NL2Q12470 440 aa2.81□□□□□ -1.96
NUP100YKL068W AIR2Q12476 344 aaKnown RBP2.81□□□□□ -1.96
NUP100YKL068W TY1A-GR2Q12485 440 aa2.81□□□□□ -1.96
NUP100YKL068W RPL40AP0CH08 128 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms