RNA–Protein interactions for RNA: YKL005C

BYE1, Transcript of Negative regulator of transcription elongation, yeast

Gene BYE1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BYE1	YKL005C	MPE1	P35728	441 aa	Known RBP	4.2	□□□□□ -1.74
BYE1	YKL005C	HXT5	P38695	592 aa		4.2	□□□□□ -1.74
BYE1	YKL005C	NOC2	P39744	710 aa	Known RBP	4.2	□□□□□ -1.74
BYE1	YKL005C	VPS27	P40343	622 aa	Known RBP	4.2	□□□□□ -1.74
BYE1	YKL005C	YNL011C	P53980	444 aa		4.2	□□□□□ -1.74
BYE1	YKL005C	HEH2	Q03281	663 aa		4.2	□□□□□ -1.74
BYE1	YKL005C	GRX3	Q03835	250 aa		4.2	□□□□□ -1.74
BYE1	YKL005C	TCB3	Q03640	1545 aa	Known RBP	4.2	□□□□□ -1.74
BYE1	YKL005C	SSB1	P11484	613 aa	Known RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	KAP122	P32767	1081 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	MCX1	P38323	520 aa	Predicted RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	SSB2	P40150	613 aa	Known RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	CCT8	P47079	568 aa	Known RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	FOX2	Q02207	900 aa	Known RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	CUS1	Q02554	436 aa	Predicted RBP	4.19	□□□□□ -1.74
BYE1	YKL005C	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	HOS4	P40480	1083 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	SVF1	Q05515	481 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	HAT1	Q12341	374 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	YOL098C	Q12496	1037 aa		4.19	□□□□□ -1.74
BYE1	YKL005C	SPC110	P32380	944 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	SKN7	P38889	622 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	POL5	P39985	1022 aa	Known RBP	4.18	□□□□□ -1.74
BYE1	YKL005C	QDR2	P40474	542 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	IES1	P43579	692 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	SKP1	P52286	194 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	ECM16	Q04217	1267 aa	Known RBP	4.18	□□□□□ -1.74
BYE1	YKL005C	YOL057W	Q08225	711 aa		4.18	□□□□□ -1.74
BYE1	YKL005C	PIL1	P53252	339 aa	Known RBP	4.17	□□□□□ -1.74
BYE1	YKL005C	KAR1	P11927	433 aa		4.17	□□□□□ -1.74
BYE1	YKL005C	STM1	P39015	273 aa	Known RBP	4.17	□□□□□ -1.74
BYE1	YKL005C	PRK1	P40494	810 aa		4.17	□□□□□ -1.74
BYE1	YKL005C	TLG1	Q03322	224 aa		4.17	□□□□□ -1.74
BYE1	YKL005C	CAB1	Q04430	367 aa		4.17	□□□□□ -1.74
BYE1	YKL005C	YDR215C	Q12240	137 aa		4.17	□□□□□ -1.74
BYE1	YKL005C	SBP1	P10080	294 aa	Known RBP	4.16	□□□□□ -1.74
BYE1	YKL005C	TAF13	P11747	167 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	DAL5	P15365	543 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	SEC20	P28791	383 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	BLI1	P35727	113 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	ALG14	P38242	237 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	APM2	P38700	605 aa		4.16	□□□□□ -1.74
BYE1	YKL005C	ESF2	P53743	316 aa	Known RBP	4.16	□□□□□ -1.74
BYE1	YKL005C	NOB1	Q08444	459 aa	Known RBP	4.16	□□□□□ -1.74
BYE1	YKL005C	RPC31	P17890	251 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	PUP1	P25043	261 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	TAT1	P38085	619 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	IPL1	P38991	367 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	MEH1	Q02205	184 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	CEF1	Q03654	590 aa	Predicted RBP	4.15	□□□□□ -1.74
BYE1	YKL005C	COG4	Q06096	861 aa		4.15	□□□□□ -1.74
BYE1	YKL005C	MRPL33	P20084	86 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	YCK2	P23292	546 aa	Known RBP	4.14	□□□□□ -1.75
BYE1	YKL005C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
BYE1	YKL005C	SUV3	P32580	737 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	PGM2	P37012	569 aa	Known RBP	4.14	□□□□□ -1.75
BYE1	YKL005C	DYS1	P38791	387 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	YGL081W	P53156	320 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	ALG12	P53730	551 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	DNM1	P54861	757 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	OYE2	Q03558	400 aa	Known RBP	4.14	□□□□□ -1.75
BYE1	YKL005C	POB3	Q04636	552 aa	Known RBP	4.14	□□□□□ -1.75
BYE1	YKL005C	ETT1	Q08421	412 aa	Known RBP	4.14	□□□□□ -1.75
BYE1	YKL005C	ERP4	Q12450	207 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	NKP1	Q12493	238 aa		4.14	□□□□□ -1.75
BYE1	YKL005C	SRP40	P32583	406 aa	Predicted RBP	4.13	□□□□□ -1.75
BYE1	YKL005C	TPS3	P38426	1054 aa	Known RBP	4.13	□□□□□ -1.75
BYE1	YKL005C	SLN1	P39928	1220 aa	Predicted RBP	4.13	□□□□□ -1.75
BYE1	YKL005C	VPS4	P52917	437 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	NNF2	P53253	936 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	YNR040W	P53736	256 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	PUF6	Q04373	656 aa	Known RBP	4.13	□□□□□ -1.75
BYE1	YKL005C	ENT2	Q05785	613 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	YSH1	Q06224	779 aa	Predicted RBP	4.13	□□□□□ -1.75
BYE1	YKL005C	PUN1	Q06991	263 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	YOR296W	Q08748	1289 aa		4.13	□□□□□ -1.75
BYE1	YKL005C	VMA3	P25515	160 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	PWP2	P25635	923 aa	Known RBP	4.12	□□□□□ -1.75
BYE1	YKL005C	PRY1	P47032	299 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	GIS4	Q04233	774 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	PSK2	Q08217	1101 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	IDI1	P15496	288 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	OPI1	P21957	404 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	NAR1	P23503	491 aa	Known RBP	4.12	□□□□□ -1.75
BYE1	YKL005C	GRX4	P32642	244 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	ISC10	P32645	267 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	LDH1	P38139	375 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	YBR197C	P38306	217 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	MCA1	Q08601	432 aa		4.12	□□□□□ -1.75
BYE1	YKL005C	SGS1	P35187	1447 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	CIT2	P08679	460 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	DPB3	P27344	201 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	YKL091C	P33324	310 aa	Known RBP	4.11	□□□□□ -1.75
BYE1	YKL005C	GRX7	P38068	203 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	GIP1	P38229	639 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	BSD2	P38356	321 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	NSE3	Q05541	303 aa		4.11	□□□□□ -1.75
BYE1	YKL005C	RRP15	Q06511	250 aa	Predicted RBP	4.11	□□□□□ -1.75
BYE1	YKL005C	SSF2	Q12153	453 aa	Predicted RBP	4.11	□□□□□ -1.75
BYE1	YKL005C	TY4B-P	A0A0B7P3V8	1104 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms