RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W SCW11P53189 542 aa4.38□□□□□ -1.71
BCD1YHR040W DOS2P54858 310 aa4.38□□□□□ -1.71
BCD1YHR040W LCB5Q06147 687 aaKnown RBP4.38□□□□□ -1.71
BCD1YHR040W SPE2P21182 396 aa4.37□□□□□ -1.71
BCD1YHR040W AHP1P38013 176 aaKnown RBP4.37□□□□□ -1.71
BCD1YHR040W OCA5P38738 679 aa4.37□□□□□ -1.71
BCD1YHR040W ALD4P46367 519 aaKnown RBP4.37□□□□□ -1.71
BCD1YHR040W TRS33Q99394 268 aa4.37□□□□□ -1.71
BCD1YHR040W TOP1P04786 769 aa4.36□□□□□ -1.71
BCD1YHR040W RPP0P05317 312 aaKnown RBP4.36□□□□□ -1.71
BCD1YHR040W DAL1P32375 460 aa4.36□□□□□ -1.71
BCD1YHR040W GLY1P37303 387 aaKnown RBP4.36□□□□□ -1.71
BCD1YHR040W BRN1P38170 754 aa4.36□□□□□ -1.71
BCD1YHR040W SSN3P39073 555 aa4.36□□□□□ -1.71
BCD1YHR040W MSN5P52918 1224 aa4.36□□□□□ -1.71
BCD1YHR040W PUF6Q04373 656 aaKnown RBP4.36□□□□□ -1.71
BCD1YHR040W CFT1Q06632 1357 aaKnown RBP4.36□□□□□ -1.71
BCD1YHR040W PDR11P40550 1411 aa4.36□□□□□ -1.71
BCD1YHR040W VTC4P47075 721 aa4.35□□□□□ -1.71
BCD1YHR040W FPR4Q06205 392 aaPredicted RBP4.35□□□□□ -1.71
BCD1YHR040W PUN1Q06991 263 aa4.35□□□□□ -1.71
BCD1YHR040W UBP1P25037 809 aa4.34□□□□□ -1.71
BCD1YHR040W YRB30P53107 440 aaPredicted RBP4.34□□□□□ -1.71
BCD1YHR040W TAF8Q03750 510 aa4.34□□□□□ -1.71
BCD1YHR040W SVF1Q05515 481 aa4.34□□□□□ -1.71
BCD1YHR040W TY1A-BLQ12266 440 aa4.34□□□□□ -1.71
BCD1YHR040W MCM1P11746 286 aa4.33□□□□□ -1.72
BCD1YHR040W NGR1P32831 672 aaKnown RBP4.33□□□□□ -1.72
BCD1YHR040W SPC42P36094 363 aa4.33□□□□□ -1.72
BCD1YHR040W TYS1P36421 394 aaKnown RBP4.33□□□□□ -1.72
BCD1YHR040W OSH7P38755 437 aa4.33□□□□□ -1.72
BCD1YHR040W CHZ1P40019 153 aaPredicted RBP4.33□□□□□ -1.72
BCD1YHR040W YTA6P40328 754 aa4.33□□□□□ -1.72
BCD1YHR040W JJJ2P46997 583 aa4.33□□□□□ -1.72
BCD1YHR040W YPQ2Q06328 317 aa4.33□□□□□ -1.72
BCD1YHR040W RRP15Q06511 250 aaPredicted RBP4.33□□□□□ -1.72
BCD1YHR040W YBL113CQ7M4S9 792 aa4.33□□□□□ -1.72
BCD1YHR040W BCK1Q01389 1478 aa4.32□□□□□ -1.72
BCD1YHR040W IRE1P32361 1115 aa4.32□□□□□ -1.72
BCD1YHR040W PRS1P32895 427 aaKnown RBP4.32□□□□□ -1.72
BCD1YHR040W CDC45Q08032 650 aa4.32□□□□□ -1.72
BCD1YHR040W MSC6Q08818 692 aaKnown RBP4.32□□□□□ -1.72
BCD1YHR040W SRS2P12954 1174 aa4.31□□□□□ -1.72
BCD1YHR040W NNF1P47149 201 aa4.31□□□□□ -1.72
BCD1YHR040W ALD2P47771 506 aa4.31□□□□□ -1.72
BCD1YHR040W UBP15P50101 1230 aa4.31□□□□□ -1.72
BCD1YHR040W CAF120P53836 1060 aa4.31□□□□□ -1.72
BCD1YHR040W FAR11P53917 953 aa4.31□□□□□ -1.72
BCD1YHR040W Q0182Q9ZZW1 134 aa4.31□□□□□ -1.72
BCD1YHR040W RAD9P14737 1309 aa4.3□□□□□ -1.72
BCD1YHR040W CDC19P00549 500 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W SLA1P32790 1244 aa4.3□□□□□ -1.72
BCD1YHR040W SCD5P34758 872 aa4.3□□□□□ -1.72
BCD1YHR040W NMD2P38798 1089 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W ERP5P38819 212 aa4.3□□□□□ -1.72
BCD1YHR040W FPR3P38911 411 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W VPS27P40343 622 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W FOX2Q02207 900 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W CWC15Q03772 175 aaKnown RBP4.3□□□□□ -1.72
BCD1YHR040W CAB1Q04430 367 aa4.3□□□□□ -1.72
BCD1YHR040W PNP1Q05788 311 aa4.3□□□□□ -1.72
BCD1YHR040W MLF3P32047 452 aa4.29□□□□□ -1.72
BCD1YHR040W SUV3P32580 737 aa4.29□□□□□ -1.72
BCD1YHR040W SHM1P37292 490 aaPredicted RBP4.29□□□□□ -1.72
BCD1YHR040W PPX1P38698 397 aa4.29□□□□□ -1.72
BCD1YHR040W ACO2P39533 789 aa4.29□□□□□ -1.72
BCD1YHR040W YAF9P53930 226 aa4.29□□□□□ -1.72
BCD1YHR040W TY1A-DR3Q12441 440 aa4.29□□□□□ -1.72
BCD1YHR040W FUR4P05316 633 aaKnown RBP4.28□□□□□ -1.72
BCD1YHR040W PDC6P26263 563 aaKnown RBP4.28□□□□□ -1.72
BCD1YHR040W GRX4P32642 244 aa4.28□□□□□ -1.72
BCD1YHR040W YIR007WP40566 764 aa4.28□□□□□ -1.72
BCD1YHR040W ROG3P43602 733 aa4.28□□□□□ -1.72
BCD1YHR040W POL32P47110 350 aa4.28□□□□□ -1.72
BCD1YHR040W YNL165WP53891 406 aa4.28□□□□□ -1.72
BCD1YHR040W MAK10Q02197 733 aa4.28□□□□□ -1.72
BCD1YHR040W TAP42Q04372 366 aa4.28□□□□□ -1.72
BCD1YHR040W PSK1P31374 1356 aa4.27□□□□□ -1.73
BCD1YHR040W RPS31P05759 152 aaKnown RBP4.27□□□□□ -1.73
BCD1YHR040W TRL1P09880 827 aaKnown RBP4.27□□□□□ -1.73
BCD1YHR040W KAR2P16474 682 aaKnown RBP4.27□□□□□ -1.73
BCD1YHR040W ISC10P32645 267 aa4.27□□□□□ -1.73
BCD1YHR040W YBR197CP38306 217 aa4.27□□□□□ -1.73
BCD1YHR040W TPS3P38426 1054 aaKnown RBP4.27□□□□□ -1.73
BCD1YHR040W HXT5P38695 592 aa4.27□□□□□ -1.73
BCD1YHR040W MTR4P47047 1073 aaKnown RBP4.27□□□□□ -1.73
BCD1YHR040W MTO1P53070 669 aa4.27□□□□□ -1.73
BCD1YHR040W RIA1P53893 1110 aa4.27□□□□□ -1.73
BCD1YHR040W TY1A-MR1Q04215 440 aa4.27□□□□□ -1.73
BCD1YHR040W KAR5Q04746 504 aa4.27□□□□□ -1.73
BCD1YHR040W PSH1Q12161 406 aa4.27□□□□□ -1.73
BCD1YHR040W NUP192P47054 1683 aa4.26□□□□□ -1.73
BCD1YHR040W LEU2P04173 364 aaPredicted RBP4.26□□□□□ -1.73
BCD1YHR040W ATE1P16639 503 aa4.26□□□□□ -1.73
BCD1YHR040W YHL050CP38721 697 aa4.26□□□□□ -1.73
BCD1YHR040W YHR219WP38900 624 aa4.26□□□□□ -1.73
BCD1YHR040W YFR016CP43597 1233 aaKnown RBP4.26□□□□□ -1.73
BCD1YHR040W NAM8Q00539 523 aaKnown RBP4.26□□□□□ -1.73
BCD1YHR040W YMR265CQ03508 461 aaKnown RBP4.26□□□□□ -1.73
BCD1YHR040W UTP4Q06679 776 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 102 ms