RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W ATG13Q06628 738 aa6.29□□□□□ -1.4
CDC43YGL155W ETT1Q08421 412 aaKnown RBP6.29□□□□□ -1.4
CDC43YGL155W TRL1P09880 827 aaKnown RBP6.28□□□□□ -1.4
CDC43YGL155W OSM1P21375 501 aaKnown RBP6.28□□□□□ -1.4
CDC43YGL155W RPN12P32496 274 aa6.28□□□□□ -1.4
CDC43YGL155W CIR1P42940 261 aa6.28□□□□□ -1.4
CDC43YGL155W FPK1P53739 893 aa6.28□□□□□ -1.4
CDC43YGL155W RMT2Q03305 412 aa6.28□□□□□ -1.4
CDC43YGL155W SAS4Q04003 481 aa6.28□□□□□ -1.4
CDC43YGL155W AIM7Q12156 149 aa6.28□□□□□ -1.4
CDC43YGL155W SWI1P09547 1314 aa6.27□□□□□ -1.41
CDC43YGL155W RPL19AP0CX82 189 aaKnown RBP6.27□□□□□ -1.41
CDC43YGL155W RPL19BP0CX83 189 aaPredicted RBP6.27□□□□□ -1.41
CDC43YGL155W TAF13P11747 167 aa6.27□□□□□ -1.41
CDC43YGL155W PEX14P53112 341 aa6.27□□□□□ -1.41
CDC43YGL155W YGL081WP53156 320 aa6.27□□□□□ -1.41
CDC43YGL155W YBP2P53169 641 aa6.27□□□□□ -1.41
CDC43YGL155W MDG1P53885 366 aa6.27□□□□□ -1.41
CDC43YGL155W ZDS2P54786 942 aa6.27□□□□□ -1.41
CDC43YGL155W VPS64Q03944 604 aa6.27□□□□□ -1.41
CDC43YGL155W ESC2Q06340 456 aa6.27□□□□□ -1.41
CDC43YGL155W SSP2Q08646 371 aa6.27□□□□□ -1.41
CDC43YGL155W RIM20Q12033 661 aa6.27□□□□□ -1.41
CDC43YGL155W DUR1,2P32528 1835 aaKnown RBP6.27□□□□□ -1.41
CDC43YGL155W LPD1P09624 499 aaKnown RBP6.26□□□□□ -1.41
CDC43YGL155W TTI1P36097 1038 aa6.26□□□□□ -1.41
CDC43YGL155W MIC60P36112 540 aa6.26□□□□□ -1.41
CDC43YGL155W AAP1P37898 856 aaKnown RBP6.26□□□□□ -1.41
CDC43YGL155W RVS167P39743 482 aaKnown RBP6.26□□□□□ -1.41
CDC43YGL155W SPO22P40511 975 aa6.26□□□□□ -1.41
CDC43YGL155W YGL242CP53066 181 aa6.26□□□□□ -1.41
CDC43YGL155W AGE1Q04412 482 aa6.26□□□□□ -1.41
CDC43YGL155W SCJ1P25303 377 aa6.25□□□□□ -1.41
CDC43YGL155W KTR1P27810 393 aaKnown RBP6.25□□□□□ -1.41
CDC43YGL155W GAR1P28007 205 aaKnown RBP6.25□□□□□ -1.41
CDC43YGL155W RKM3P38222 552 aa6.25□□□□□ -1.41
CDC43YGL155W RRN7P40992 514 aa6.25□□□□□ -1.41
CDC43YGL155W YNL115CP53925 644 aa6.25□□□□□ -1.41
CDC43YGL155W CTR9P89105 1077 aa6.25□□□□□ -1.41
CDC43YGL155W RMD1Q03441 430 aa6.25□□□□□ -1.41
CDC43YGL155W PSK2Q08217 1101 aa6.25□□□□□ -1.41
CDC43YGL155W YRF1-3P0CX14 1859 aa6.24□□□□□ -1.41
CDC43YGL155W YRF1-7P0CX15 1859 aa6.24□□□□□ -1.41
CDC43YGL155W YRF1-6P53819 1859 aa6.24□□□□□ -1.41
CDC43YGL155W ELM1P32801 640 aa6.24□□□□□ -1.41
CDC43YGL155W YKL133CP36066 463 aa6.24□□□□□ -1.41
CDC43YGL155W STM1P39015 273 aaKnown RBP6.24□□□□□ -1.41
CDC43YGL155W CCT5P40413 562 aaKnown RBP6.24□□□□□ -1.41
CDC43YGL155W MRPS35P53292 345 aa6.24□□□□□ -1.41
CDC43YGL155W ADE16P54113 591 aaKnown RBP6.24□□□□□ -1.41
CDC43YGL155W APC11Q12157 165 aa6.24□□□□□ -1.41
CDC43YGL155W NOP58Q12499 511 aaKnown RBP6.24□□□□□ -1.41
CDC43YGL155W OSH3P38713 996 aaKnown RBP6.23□□□□□ -1.41
CDC43YGL155W PAC1P39946 494 aaKnown RBP6.23□□□□□ -1.41
CDC43YGL155W AIM9P40053 627 aaKnown RBP6.23□□□□□ -1.41
CDC43YGL155W HST2P53686 357 aa6.23□□□□□ -1.41
CDC43YGL155W KRE33P53914 1056 aaKnown RBP6.23□□□□□ -1.41
CDC43YGL155W PKH1Q03407 766 aa6.23□□□□□ -1.41
CDC43YGL155W MTC5Q03897 1148 aa6.23□□□□□ -1.41
CDC43YGL155W PEX19Q07418 342 aa6.23□□□□□ -1.41
CDC43YGL155W PSH1Q12161 406 aa6.23□□□□□ -1.41
CDC43YGL155W KIN1P13185 1064 aa6.22□□□□□ -1.41
CDC43YGL155W PRX1P34227 261 aaKnown RBP6.22□□□□□ -1.41
CDC43YGL155W SIS2P36024 562 aa6.22□□□□□ -1.41
CDC43YGL155W RPN1P38764 993 aaKnown RBP6.22□□□□□ -1.41
CDC43YGL155W TUB4P53378 473 aa6.22□□□□□ -1.41
CDC43YGL155W ARP5P53946 755 aa6.22□□□□□ -1.41
CDC43YGL155W ALO1P54783 526 aaKnown RBP6.22□□□□□ -1.41
CDC43YGL155W TYW1Q08960 810 aaKnown RBP6.22□□□□□ -1.41
CDC43YGL155W ENT1Q12518 454 aa6.22□□□□□ -1.41
CDC43YGL155W DID4P36108 232 aa6.21□□□□□ -1.42
CDC43YGL155W CWH41P53008 833 aa6.21□□□□□ -1.42
CDC43YGL155W PHM7Q12252 991 aa6.21□□□□□ -1.42
CDC43YGL155W SNU66Q12420 587 aaPredicted RBP6.21□□□□□ -1.42
CDC43YGL155W GRX1P25373 110 aaKnown RBP6.2□□□□□ -1.42
CDC43YGL155W APL2P36000 726 aaPredicted RBP6.2□□□□□ -1.42
CDC43YGL155W MRPL10P36520 322 aa6.2□□□□□ -1.42
CDC43YGL155W PBY1P38254 753 aa6.2□□□□□ -1.42
CDC43YGL155W YHL017WP38745 532 aa6.2□□□□□ -1.42
CDC43YGL155W BRE2P43132 505 aa6.2□□□□□ -1.42
CDC43YGL155W CTF18P49956 741 aa6.2□□□□□ -1.42
CDC43YGL155W FRK1Q03002 865 aaPredicted RBP6.2□□□□□ -1.42
CDC43YGL155W YPR204WQ08995 1032 aa6.2□□□□□ -1.42
CDC43YGL155W ELG1Q12050 791 aa6.2□□□□□ -1.42
CDC43YGL155W CYC8P14922 966 aa6.19□□□□□ -1.42
CDC43YGL155W OPI1P21957 404 aa6.19□□□□□ -1.42
CDC43YGL155W SLY41P22215 453 aa6.19□□□□□ -1.42
CDC43YGL155W MCM2P29469 868 aa6.19□□□□□ -1.42
CDC43YGL155W SPT16P32558 1035 aaKnown RBP6.19□□□□□ -1.42
CDC43YGL155W MPE1P35728 441 aaKnown RBP6.19□□□□□ -1.42
CDC43YGL155W TPM2P40414 161 aa6.19□□□□□ -1.42
CDC43YGL155W YKE2P52553 114 aa6.19□□□□□ -1.42
CDC43YGL155W YPL150WQ12152 901 aa6.19□□□□□ -1.42
CDC43YGL155W QCR6P00127 147 aa6.18□□□□□ -1.42
CDC43YGL155W ESS1P22696 170 aa6.18□□□□□ -1.42
CDC43YGL155W GBP2P25555 427 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
CDC43YGL155W MRF1P30775 413 aaPredicted RBP6.18□□□□□ -1.42
CDC43YGL155W KTR3P38130 404 aaPredicted RBP6.18□□□□□ -1.42
CDC43YGL155W ENV9Q08651 330 aa6.18□□□□□ -1.42
CDC43YGL155W MMP1Q12372 583 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms