RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeast

Gene CGR1, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CGR1	YGL029W	RPB10	P22139	70 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	MCM2	P29469	868 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	VAC8	P39968	578 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	RNH70	P53331	553 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	ALD6	P54115	500 aa	Known RBP	4.67	□□□□□ -1.66
CGR1	YGL029W	SPR28	Q04921	423 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	PIN2	Q12057	282 aa		4.67	□□□□□ -1.66
CGR1	YGL029W	SSF2	Q12153	453 aa	Predicted RBP	4.67	□□□□□ -1.66
CGR1	YGL029W	TRP3	P00937	484 aa		4.66	□□□□□ -1.66
CGR1	YGL029W	RGP1	P16664	663 aa		4.66	□□□□□ -1.66
CGR1	YGL029W	NGR1	P32831	672 aa	Known RBP	4.66	□□□□□ -1.66
CGR1	YGL029W	YKR073C	P36153	106 aa		4.66	□□□□□ -1.66
CGR1	YGL029W	RMD1	Q03441	430 aa		4.66	□□□□□ -1.66
CGR1	YGL029W	CAB1	Q04430	367 aa		4.66	□□□□□ -1.66
CGR1	YGL029W	TOP1	P04786	769 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	CYT1	P07143	309 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	CIT2	P08679	460 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	SAC7	P17121	654 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	RPT1	P33299	467 aa	Known RBP	4.65	□□□□□ -1.67
CGR1	YGL029W	NTH2	P35172	780 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	YBR197C	P38306	217 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	ATG36	P46983	293 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	YNL165W	P53891	406 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	AOS1	Q06624	347 aa		4.65	□□□□□ -1.67
CGR1	YGL029W	RPS6A	P0CX37	236 aa	Known RBP	4.64	□□□□□ -1.67
CGR1	YGL029W	RPS6B	P0CX38	236 aa	Predicted RBP	4.64	□□□□□ -1.67
CGR1	YGL029W	NAR1	P23503	491 aa	Known RBP	4.64	□□□□□ -1.67
CGR1	YGL029W	ISC10	P32645	267 aa		4.64	□□□□□ -1.67
CGR1	YGL029W	PRK1	P40494	810 aa		4.64	□□□□□ -1.67
CGR1	YGL029W	DAK2	P43550	591 aa		4.64	□□□□□ -1.67
CGR1	YGL029W	MED7	Q08278	222 aa		4.64	□□□□□ -1.67
CGR1	YGL029W	RPP1A	P05318	106 aa	Predicted RBP	4.63	□□□□□ -1.67
CGR1	YGL029W	YJL049W	P47048	450 aa		4.63	□□□□□ -1.67
CGR1	YGL029W	ARI1	P53111	347 aa	Known RBP	4.63	□□□□□ -1.67
CGR1	YGL029W	ALG12	P53730	551 aa		4.63	□□□□□ -1.67
CGR1	YGL029W	UFD2	P54860	961 aa		4.63	□□□□□ -1.67
CGR1	YGL029W	NSE3	Q05541	303 aa		4.63	□□□□□ -1.67
CGR1	YGL029W	SWI5	P08153	709 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	RRP14	P36080	434 aa	Known RBP	4.62	□□□□□ -1.67
CGR1	YGL029W	BUD6	P41697	788 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	CTH1	P47976	325 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	CWH41	P53008	833 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	RPN4	Q03465	531 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	GIS4	Q04233	774 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
CGR1	YGL029W	ESF1	Q06344	628 aa	Known RBP	4.62	□□□□□ -1.67
CGR1	YGL029W	CLN2	P20438	545 aa		4.61	□□□□□ -1.67
CGR1	YGL029W	GCD6	P32501	712 aa	Known RBP	4.61	□□□□□ -1.67
CGR1	YGL029W	YKL091C	P33324	310 aa	Known RBP	4.61	□□□□□ -1.67
CGR1	YGL029W	HXT5	P38695	592 aa		4.61	□□□□□ -1.67
CGR1	YGL029W	FPR3	P38911	411 aa	Known RBP	4.61	□□□□□ -1.67
CGR1	YGL029W	TAT2	P38967	592 aa		4.61	□□□□□ -1.67
CGR1	YGL029W	YGR122W	P53272	402 aa		4.61	□□□□□ -1.67
CGR1	YGL029W	FOX2	Q02207	900 aa	Known RBP	4.61	□□□□□ -1.67
CGR1	YGL029W	CYC8	P14922	966 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	SRP40	P32583	406 aa	Predicted RBP	4.6	□□□□□ -1.67
CGR1	YGL029W	ELM1	P32801	640 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	LIP5	P32875	414 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	VPS35	P34110	944 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	KAE1	P36132	386 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	RRM3	P38766	723 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	RPS26A	P39938	119 aa	Known RBP	4.6	□□□□□ -1.67
CGR1	YGL029W	RPS26B	P39939	119 aa	Known RBP	4.6	□□□□□ -1.67
CGR1	YGL029W	MAD1	P40957	749 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	CDC55	Q00362	526 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	HEH2	Q03281	663 aa		4.6	□□□□□ -1.67
CGR1	YGL029W	COQ2	P32378	372 aa		4.59	□□□□□ -1.67
CGR1	YGL029W	PPG1	P32838	368 aa		4.59	□□□□□ -1.67
CGR1	YGL029W	MNR2	P35724	969 aa		4.59	□□□□□ -1.67
CGR1	YGL029W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CGR1	YGL029W	BDF2	Q07442	638 aa		4.59	□□□□□ -1.67
CGR1	YGL029W	YLR122C	Q12312	125 aa		4.59	□□□□□ -1.67
CGR1	YGL029W	HXK1	P04806	485 aa	Known RBP	4.58	□□□□□ -1.68
CGR1	YGL029W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CGR1	YGL029W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CGR1	YGL029W	TOS1	P38288	455 aa		4.58	□□□□□ -1.68
CGR1	YGL029W	YTA6	P40328	754 aa		4.58	□□□□□ -1.68
CGR1	YGL029W	PPM2	Q08282	695 aa		4.58	□□□□□ -1.68
CGR1	YGL029W	MCM1	P11746	286 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	MRPL33	P20084	86 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	MLF3	P32047	452 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	SFA1	P32771	386 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	PET112	P33893	541 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	FAA3	P39002	694 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	OSW7	P43611	510 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	MTO1	P53070	669 aa		4.57	□□□□□ -1.68
CGR1	YGL029W	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	YJR008W	P47085	338 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	SAM37	P50110	327 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	SUT1	P53032	299 aa	Known RBP	4.56	□□□□□ -1.68
CGR1	YGL029W	YNL011C	P53980	444 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
CGR1	YGL029W	RSC4	Q02206	625 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	UBX5	Q06682	500 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	BRE4	Q07660	1125 aa		4.56	□□□□□ -1.68
CGR1	YGL029W	PEP7	P32609	515 aa		4.55	□□□□□ -1.68
CGR1	YGL029W	CIC1	P38779	376 aa	Known RBP	4.55	□□□□□ -1.68
CGR1	YGL029W	CDC53	Q12018	815 aa	Known RBP	4.55	□□□□□ -1.68
CGR1	YGL029W	WRS1	Q12109	432 aa	Known RBP	4.55	□□□□□ -1.68
CGR1	YGL029W	DUT1	P33317	147 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms