RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SDC1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDC1	YDR469W	BIO5	P53744	561 aa	Known RBP	5.14	□□□□□ -1.59
SDC1	YDR469W	ISC10	P32645	267 aa		5.13	□□□□□ -1.59
SDC1	YDR469W	POL12	P38121	705 aa	Predicted RBP	5.13	□□□□□ -1.59
SDC1	YDR469W	HGH1	P48362	394 aa	Known RBP	5.13	□□□□□ -1.59
SDC1	YDR469W	GUP1	P53154	560 aa		5.13	□□□□□ -1.59
SDC1	YDR469W	EMG1	Q06287	252 aa	Known RBP	5.13	□□□□□ -1.59
SDC1	YDR469W	GCD1	P09032	578 aa	Predicted RBP	5.12	□□□□□ -1.59
SDC1	YDR469W	UBX7	P38349	436 aa		5.12	□□□□□ -1.59
SDC1	YDR469W	ALD3	P54114	506 aa		5.12	□□□□□ -1.59
SDC1	YDR469W	SOG2	Q08817	791 aa		5.12	□□□□□ -1.59
SDC1	YDR469W	ERS1	P17261	260 aa		5.1	□□□□□ -1.59
SDC1	YDR469W	LEM3	P42838	414 aa		5.1	□□□□□ -1.59
SDC1	YDR469W	ALD4	P46367	519 aa	Known RBP	5.1	□□□□□ -1.59
SDC1	YDR469W	ELG1	Q12050	791 aa		5.1	□□□□□ -1.59
SDC1	YDR469W	YKL222C	P35995	705 aa		5.09	□□□□□ -1.59
SDC1	YDR469W	KIP3	P53086	805 aa	Known RBP	5.09	□□□□□ -1.59
SDC1	YDR469W	SPO71	Q03868	1245 aa		5.09	□□□□□ -1.59
SDC1	YDR469W	GIC2	Q06648	383 aa		5.09	□□□□□ -1.59
SDC1	YDR469W	YCR015C	P25616	317 aa		5.08	□□□□□ -1.6
SDC1	YDR469W	NEO1	P40527	1151 aa		5.08	□□□□□ -1.6
SDC1	YDR469W	DFG16	Q99234	619 aa		5.08	□□□□□ -1.6
SDC1	YDR469W	FUS1	P11710	512 aa		5.07	□□□□□ -1.6
SDC1	YDR469W	AIM46	P38885	310 aa		5.07	□□□□□ -1.6
SDC1	YDR469W	NIT1	P40447	199 aa		5.07	□□□□□ -1.6
SDC1	YDR469W	GAS1	P22146	559 aa	Known RBP	5.06	□□□□□ -1.6
SDC1	YDR469W	TTI1	P36097	1038 aa		5.06	□□□□□ -1.6
SDC1	YDR469W	ECL1	P48235	211 aa		5.06	□□□□□ -1.6
SDC1	YDR469W	BOI1	P38041	980 aa	Known RBP	5.05	□□□□□ -1.6
SDC1	YDR469W	FIR1	P40020	876 aa		5.05	□□□□□ -1.6
SDC1	YDR469W	YNR065C	P53751	1116 aa		5.05	□□□□□ -1.6
SDC1	YDR469W	PUN1	Q06991	263 aa		5.05	□□□□□ -1.6
SDC1	YDR469W	HXT8	P40886	569 aa		5.04	□□□□□ -1.6
SDC1	YDR469W	YJR124C	P47159	448 aa		5.04	□□□□□ -1.6
SDC1	YDR469W	HAS1	Q03532	505 aa	Known RBP	5.04	□□□□□ -1.6
SDC1	YDR469W	WHI3	P34761	661 aa	Known RBP	5.03	□□□□□ -1.6
SDC1	YDR469W	YBR287W	P38355	427 aa		5.03	□□□□□ -1.6
SDC1	YDR469W	YHL008C	P38750	627 aa		5.03	□□□□□ -1.6
SDC1	YDR469W	RGD2	P43556	714 aa		5.03	□□□□□ -1.6
SDC1	YDR469W	PRP43	P53131	767 aa	Known RBP	5.03	□□□□□ -1.6
SDC1	YDR469W	ESC8	Q08119	714 aa		5.03	□□□□□ -1.6
SDC1	YDR469W	MMM1	P41800	426 aa		5.02	□□□□□ -1.61
SDC1	YDR469W	TAF1	P46677	1066 aa		5.02	□□□□□ -1.61
SDC1	YDR469W	GPT2	P36148	743 aa		5	□□□□□ -1.61
SDC1	YDR469W	SUT1	P53032	299 aa	Known RBP	5	□□□□□ -1.61
SDC1	YDR469W	CPS1	P27614	576 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	HSP78	P33416	811 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	KTR2	P33550	425 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	CIT3	P43635	486 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	FAR11	P53917	953 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	YMR074C	Q04773	145 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	CDA2	Q06703	312 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	NSI1	Q12457	570 aa		4.99	□□□□□ -1.61
SDC1	YDR469W	HVG1	P0CE11	249 aa		4.98	□□□□□ -1.61
SDC1	YDR469W	PUF6	Q04373	656 aa	Known RBP	4.98	□□□□□ -1.61
SDC1	YDR469W	YOR223W	Q12015	292 aa		4.98	□□□□□ -1.61
SDC1	YDR469W	GLO4	Q12320	285 aa		4.98	□□□□□ -1.61
SDC1	YDR469W	PUP1	P25043	261 aa		4.97	□□□□□ -1.61
SDC1	YDR469W	GIP4	P39732	760 aa		4.97	□□□□□ -1.61
SDC1	YDR469W	FET4	P40988	552 aa		4.97	□□□□□ -1.61
SDC1	YDR469W	RCM1	P53972	490 aa		4.97	□□□□□ -1.61
SDC1	YDR469W	TIF6	Q12522	245 aa	Known RBP	4.97	□□□□□ -1.61
SDC1	YDR469W	SRS2	P12954	1174 aa		4.96	□□□□□ -1.62
SDC1	YDR469W	TSA1	P34760	196 aa	Known RBP	4.96	□□□□□ -1.62
SDC1	YDR469W	NTA1	P40354	457 aa		4.96	□□□□□ -1.62
SDC1	YDR469W	RAD55	P38953	406 aa		4.94	□□□□□ -1.62
SDC1	YDR469W	DOT1	Q04089	582 aa	Known RBP	4.94	□□□□□ -1.62
SDC1	YDR469W	RPB10	P22139	70 aa		4.93	□□□□□ -1.62
SDC1	YDR469W	PYC2	P32327	1180 aa	Known RBP	4.93	□□□□□ -1.62
SDC1	YDR469W	THI80	P35202	319 aa		4.93	□□□□□ -1.62
SDC1	YDR469W	PSY2	P40164	858 aa		4.93	□□□□□ -1.62
SDC1	YDR469W	OYE3	P41816	400 aa	Predicted RBP	4.93	□□□□□ -1.62
SDC1	YDR469W	YOR059C	Q08448	450 aa	Known RBP	4.92	□□□□□ -1.62
SDC1	YDR469W	APC11	Q12157	165 aa		4.92	□□□□□ -1.62
SDC1	YDR469W	IRS4	P36115	615 aa	Known RBP	4.91	□□□□□ -1.62
SDC1	YDR469W	CWC15	Q03772	175 aa	Known RBP	4.91	□□□□□ -1.62
SDC1	YDR469W	ADP1	P25371	1049 aa		4.9	□□□□□ -1.63
SDC1	YDR469W	RPS4A	P0CX35	261 aa	Known RBP	4.89	□□□□□ -1.63
SDC1	YDR469W	RPS4B	P0CX36	261 aa	Known RBP	4.89	□□□□□ -1.63
SDC1	YDR469W	FLR1	P38124	548 aa		4.89	□□□□□ -1.63
SDC1	YDR469W	YML083C	Q04526	418 aa		4.89	□□□□□ -1.63
SDC1	YDR469W	PNP1	Q05788	311 aa		4.89	□□□□□ -1.63
SDC1	YDR469W	RRN6	P32786	894 aa		4.88	□□□□□ -1.63
SDC1	YDR469W	EAR1	Q03212	550 aa		4.88	□□□□□ -1.63
SDC1	YDR469W	SSY1	Q03770	852 aa		4.88	□□□□□ -1.63
SDC1	YDR469W	SMC1	P32908	1225 aa		4.87	□□□□□ -1.63
SDC1	YDR469W	MSH6	Q03834	1242 aa		4.87	□□□□□ -1.63
SDC1	YDR469W	YLL054C	Q12244	843 aa		4.87	□□□□□ -1.63
SDC1	YDR469W	PRP6	P19735	899 aa	Predicted RBP	4.86	□□□□□ -1.63
SDC1	YDR469W	TRE1	Q08919	783 aa		4.86	□□□□□ -1.63
SDC1	YDR469W	PRO1	P32264	428 aa		4.85	□□□□□ -1.63
SDC1	YDR469W	AIM3	P38266	947 aa	Known RBP	4.85	□□□□□ -1.63
SDC1	YDR469W	GCV1	P48015	400 aa		4.85	□□□□□ -1.63
SDC1	YDR469W	ALG6	Q12001	544 aa	Known RBP	4.85	□□□□□ -1.63
SDC1	YDR469W	MSH4	P40965	878 aa	Predicted RBP	4.84	□□□□□ -1.63
SDC1	YDR469W	ORC3	P54790	616 aa		4.84	□□□□□ -1.63
SDC1	YDR469W	CTR9	P89105	1077 aa		4.84	□□□□□ -1.63
SDC1	YDR469W	GIS1	Q03833	894 aa		4.84	□□□□□ -1.63
SDC1	YDR469W	HDA2	Q06629	674 aa		4.84	□□□□□ -1.63
SDC1	YDR469W	YIG1	Q08956	461 aa		4.84	□□□□□ -1.63
SDC1	YDR469W	LPX1	Q12405	387 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms